Gene: AT5G20950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G20950
  • Transcript Identifier AT5G20950.1
  • Gene Type Coding gene
  • Location Chr5 : 7107609-7110775 : negative

Gene Family Information

  • ID HOM05D000495
  • #Genes/#Species 1074/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G20950.1
  • uniprot Q8W112

Descriptions

  • Description Glycosyl hydrolase family protein
  • Computational description Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 10079 Blast hits to 9261 proteins in 1444 species: Archae - 71; Bacteria - 6091; Metazoa - 14; Fungi - 1552; Plants - 486; Viruses - 0; Other Eukaryotes - 1865 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009251
IBA
Gene Ontologyglucan catabolic process1
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0008152
IEA
GOA Databasemetabolic process
GO:0009969
IMP
Gene Ontologyxyloglucan biosynthetic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0008422
IDA
IBA
Gene Ontologybeta-glucosidase activity1 2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma3
GO:0009505
IDA
GOA Databaseplant-type cell wall
GO:0009505
HDA
Gene Ontologyplant-type cell wall4
GO:0005618
IDA
GOA Databasecell wall
GO:0005618
HDA
Gene Ontologycell wall5
GO:0009536
HDA
Gene Ontologyplastid6
GO:0048046
IDA
Gene Ontologyapoplast2
GO:0005829
RCA
Gene Ontologycytosol7
GO:0005739
ISM
Gene Ontologymitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily
IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily
IPR001764 Glycoside hydrolase, family 3, N-terminal
IPR002772 Glycoside hydrolase family 3 C-terminal domain
IPR017853 Glycoside hydrolase superfamily
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase