Gene: Pp3c20_7190

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_7190
  • Transcript Identifier Pp3c20_7190V3.2
  • Gene Type Coding gene
  • Location Chr20 : 4409990-4413997 : negative

Gene Family Information

  • ID HOM05D001363
  • #Genes/#Species 458/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_7190V3.2
  • pacid 32947702
  • alias Phpat.020G030700
  • alias Pp1s9_248V6
  • uniprot A0A2K1IUE4

Descriptions

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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007130
ISO
PLAZA Integrative Orthologysynaptonemal complex assembly Os12g0143800
GO:0051026
IEA
GOA Databasechiasma assembly
GO:0000730
IBA
GOA DatabaseDNA recombinase assembly
GO:0007131
IBA
IEA
GOA Databasereciprocal meiotic recombination
GO:0007131
IEA
InterProreciprocal meiotic recombination
GO:0006312
IBA
GOA Databasemitotic recombination
GO:0042148
IBA
GOA Databasestrand invasion
GO:0070192
IBA
GOA Databasechromosome organization involved in meiotic cell cycle
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006259
IEA
GOA DatabaseDNA metabolic process
GO:0051321
IEA
GOA Databasemeiotic cell cycle
GO:0007049
IEA
GOA Databasecell cycle

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008094
IBA
IEA
GOA DatabaseATPase, acting on DNA
GO:0017116
ISO
PLAZA Integrative Orthologysingle-stranded DNA helicase activity Os12g0143800
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G22880
GO:0000150
IBA
IEA
GOA DatabaseDNA strand exchange activity
GO:0000150
IEA
InterProDNA strand exchange activity
GO:0003690
IBA
GOA Databasedouble-stranded DNA binding
GO:0003697
IBA
GOA Databasesingle-stranded DNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
GOA DatabaseATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000794
IBA
GOA Databasecondensed nuclear chromosome
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR033925 Rad51/DMC1/RadA
IPR016467 DNA recombination and repair protein, RecA-like
IPR013632 DNA recombination and repair protein Rad51-like, C-terminal
IPR003593 AAA+ ATPase domain
IPR011940 Meiotic recombination protein Dmc1
Mapman id Description
13.3.5.4.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.recombinase (DMC1)