Gene: Os12g0143800

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os12g0143800
  • Transcript Identifier Os12t0143800-01
  • Gene Type Coding gene
  • Location chr12 : 2154333-2158089 : negative

Gene Family Information

  • ID HOM05D001363
  • #Genes/#Species 458/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os12t0143800-01
  • MSU-ID LOC_Os12g04980.1
  • symbol RiLIM15A
  • symbol DMC1
  • symbol DMC1A
  • symbol OsDMC1
  • symbol Dmc1A
  • symbol OsDmc1A
  • symbol OsDMC1A
  • name MEIOTIC PROTEIN Dmc1A
  • uniprot Q7GBF8

Descriptions

  • Description Meiosis-specific DNA recombinase, Synaptonemal complex (SC) assembly
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000730
IBA
GOA DatabaseDNA recombinase assembly
GO:0070192
IBA
GOA Databasechromosome organization involved in meiotic cell cycle
GO:0042148
IBA
GOA Databasestrand invasion
GO:0006312
IBA
GOA Databasemitotic recombination
GO:0007131
IMP
IBA
IEA
GOA Databasereciprocal meiotic recombination
GO:0007131
IEA
InterProreciprocal meiotic recombination
GO:0051026
ISO
PLAZA Integrative Orthologychiasma assembly AT3G22880
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0007049
IEA
GOA Databasecell cycle
GO:0051321
IEA
GOA Databasemeiotic cell cycle
GO:0006259
IEA
GOA DatabaseDNA metabolic process
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding
GO:0007130
IMP
GOA Databasesynaptonemal complex assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003697
IDA
IBA
GOA Databasesingle-stranded DNA binding
GO:0003690
IDA
IBA
GOA Databasedouble-stranded DNA binding
GO:0000150
IBA
IEA
GOA DatabaseDNA strand exchange activity
GO:0000150
IEA
InterProDNA strand exchange activity
GO:0008094
IBA
IEA
GOA DatabaseATPase, acting on DNA
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G22880
GO:0005524
IEA
GOA DatabaseATP binding
GO:0017116
IDA
GOA Databasesingle-stranded DNA helicase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000794
IBA
GOA Databasecondensed nuclear chromosome
GO:0005634
IDA
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016467 DNA recombination and repair protein, RecA-like
IPR011940 Meiotic recombination protein Dmc1
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR033925 Rad51/DMC1/RadA
IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical
IPR013632 DNA recombination and repair protein Rad51-like, C-terminal
Mapman id Description
13.3.5.4.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.recombinase (DMC1)