Gene: AT3G22880

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G22880
  • Transcript Identifier AT3G22880.1
  • Gene Type Coding gene
  • Location Chr3 : 8097948-8100740 : negative

Gene Family Information

  • ID HOM05D001363
  • #Genes/#Species 458/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G22880.1
  • symbol DMC1
  • Alias ARLIM15,ARABIDOPSIS HOMOLOG OF LILY MESSAGES INDUCED AT MEIOSIS 15,ATDMC1,ARABIDOPSIS THALIANA DISRUPTION OF MEIOTIC CONTROL 1
  • full_name DISRUPTION OF MEIOTIC CONTROL 1
  • uniprot Q39009

Descriptions

  • Description DNA repair (Rad51) family protein
  • Computational description DISRUPTION OF MEIOTIC CONTROL 1 (DMC1); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, meiosis, chiasma assembly, reciprocal meiotic recombination, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA repair Rad51/transcription factor NusA, alpha-helical (InterPro:IPR010995), ATPase, AAA type, core (InterPro:IPR003593), Meiotic recombinase Dmc1 (InterPro:IPR011940), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: RAS associated with diabetes protein 51 (TAIR:AT5G20850.1); Has 11998 Blast hits to 11924 proteins in 3797 species: Archae - 689; Bacteria - 8026; Metazoa - 742; Fungi - 447; Plants - 503; Viruses - 22; Other Eukaryotes - 1569 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007131
IBA
IEA
Gene Ontologyreciprocal meiotic recombination1
GO:0007131
IEA
InterProreciprocal meiotic recombination
GO:0000730
IBA
Gene OntologyDNA recombinase assembly1
GO:0007049
IEA
GOA Databasecell cycle
GO:0051321
IEA
GOA Databasemeiotic cell cycle
GO:0051321
TAS
Gene Ontologymeiotic cell cycle2
GO:0006259
IEA
GOA DatabaseDNA metabolic process
GO:0006259
IDA
Gene OntologyDNA metabolic process3
GO:0007130
ISO
PLAZA Integrative Orthologysynaptonemal complex assembly Os12g0143800
GO:0051026
IMP, IGI
Gene Ontologychiasma assembly4
GO:0006281
IEA
Gene OntologyDNA repair
GO:0070192
IBA
Gene Ontologychromosome organization involved in meiotic cell cycle1
GO:0006312
IBA
Gene Ontologymitotic recombination1
GO:0042148
IBA
Gene Ontologystrand invasion1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0003690
IBA
Gene Ontologydouble-stranded DNA binding1
GO:0003697
IBA
Gene Ontologysingle-stranded DNA binding1
GO:0000150
IBA
IEA
Gene OntologyDNA strand exchange activity1
GO:0000150
IEA
InterProDNA strand exchange activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0008094
IBA
IEA
Gene OntologyATPase, acting on DNA1
GO:0003677
IEA
Gene OntologyDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0017116
ISO
PLAZA Integrative Orthologysingle-stranded DNA helicase activity Os12g0143800
GO:0005515
IPI
Gene Ontologyprotein binding5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
ISM
IEA
Gene Ontologynucleus6
GO:0005634
IEA
InterPronucleus
GO:0000794
IBA
Gene Ontologycondensed nuclear chromosome1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011940 Meiotic recombination protein Dmc1
IPR003593 AAA+ ATPase domain
IPR016467 DNA recombination and repair protein, RecA-like
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR033925 Rad51/DMC1/RadA
IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical
IPR013632 DNA recombination and repair protein Rad51-like, C-terminal
Mapman id Description
13.3.5.4.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.recombinase (DMC1)