Gene: Pp3c20_5640

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_5640
  • Transcript Identifier Pp3c20_5640V3.3
  • Gene Type Coding gene
  • Location Chr20 : 3489681-3493398 : positive

Gene Family Information

  • ID HOM05D004007
  • #Genes/#Species 175/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_5640V3.3
  • pacid 32946731
  • alias Phypa_104557
  • alias Phpat.020G023400
  • alias Pp1s9_103V6
  • uniprot A0A2K1IU67

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046686
IEA
GOA Databaseresponse to cadmium ion
GO:0006104
IBA
GOA Databasesuccinyl-CoA metabolic process
GO:0006099
IBA
IEA
GOA Databasetricarboxylic acid cycle
GO:0006099
IEA
InterProtricarboxylic acid cycle

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005507
IEA
GOA Databasecopper ion binding
GO:0004776
IBA
GOA Databasesuccinate-CoA ligase (GDP-forming) activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016874
IEA
GOA Databaseligase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004775
IEA
GOA Databasesuccinate-CoA ligase (ADP-forming) activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000287
IEA
GOA Databasemagnesium ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IBA
IEA
GOA Databasemitochondrion
GO:0042709
IBA
GOA Databasesuccinate-CoA ligase complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005809 Succinate--CoA synthetase, beta subunit
IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type
IPR016102 Succinyl-CoA synthetase-like
IPR005811 ATP-citrate lyase/succinyl-CoA ligase
IPR013815 ATP-grasp fold, subdomain 1
Mapman id Description
2.3.5.2 Cellular respiration.tricarboxylic acid cycle.succinyl-CoA ligase heterodimer.subunit beta