Gene: Pp3c20_3400

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_3400
  • Transcript Identifier Pp3c20_3400V3.2
  • Gene Type Coding gene
  • Location Chr20 : 1782617-1786151 : negative

Gene Family Information

  • ID HOM05D000776
  • #Genes/#Species 759/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_3400V3.2
  • pacid 32945663
  • alias Pp1s187_11V6
  • alias Phypa_168734
  • alias Phpat.020G016300
  • uniprot A9T951

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009969
ISO
PLAZA Integrative Orthologyxyloglucan biosynthetic process AT1G64440
GO:0009832
ISO
PLAZA Integrative Orthologyplant-type cell wall biogenesis AT1G64440
GO:0042546
ISO
PLAZA Integrative Orthologycell wall biogenesis AT4G23920
GO:0010246
ISO
PLAZA Integrative Orthologyrhamnogalacturonan I biosynthetic process AT1G64440
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G63180
GO:0046369
ISO
PLAZA Integrative Orthologygalactose biosynthetic process AT1G12780
GO:0010306
ISO
PLAZA Integrative Orthologyrhamnogalacturonan II biosynthetic process AT1G64440
GO:0010053
ISO
PLAZA Integrative Orthologyroot epidermal cell differentiation AT1G64440
GO:0006364
IBA
GOA DatabaserRNA processing
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0006012
IEA
GOA Databasegalactose metabolic process
GO:0006012
IEA
InterProgalactose metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
ISO
PLAZA Integrative Orthologyprotein dimerization activity AT1G12780
GO:0050373
ISO
PLAZA Integrative OrthologyUDP-arabinose 4-epimerase activity AT1G12780
GO:0003978
IEA
GOA DatabaseUDP-glucose 4-epimerase activity
GO:0003978
IEA
InterProUDP-glucose 4-epimerase activity
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0016853
IEA
GOA Databaseisomerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G12780
GO:0005795
ISO
PLAZA Integrative OrthologyGolgi stack AT1G64440
GO:0005829
IBA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016040 NAD(P)-binding domain
IPR036291 NAD(P)-binding domain superfamily
IPR005886 UDP-glucose 4-epimerase
Mapman id Description
3.13.8 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucose 4-epimerase