Gene: Pp3c20_10930

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_10930
  • Transcript Identifier Pp3c20_10930V3.1
  • Gene Type Coding gene
  • Location Chr20 : 6856587-6859616 : negative

Gene Family Information

  • ID HOM05D000446
  • #Genes/#Species 1165/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_10930V3.1
  • pacid 32947850
  • alias Phpat.020G044500
  • alias Pp1s406_3V6
  • alias Phypa_153961
  • uniprot A0A2K1IUW5

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010214
ISO
PLAZA Integrative Orthologyseed coat development AT5G49360
GO:0009627
ISO
PLAZA Integrative Orthologysystemic acquired resistance AT5G64570
GO:0031222
IBA
GOA Databasearabinan catabolic process
GO:0045493
IBA
IEA
GOA Databasexylan catabolic process
GO:0045493
IEA
InterProxylan catabolic process
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0008152
IEA
GOA Databasemetabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009044
IBA
IEA
GOA Databasexylan 1,4-beta-xylosidase activity
GO:0009044
IEA
InterProxylan 1,4-beta-xylosidase activity
GO:0046556
IBA
GOA Databasealpha-L-arabinofuranosidase activity
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G10560
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G10560
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G64570
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G64570
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G78060
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G78060
GO:0009505
IBA
GOA Databaseplant-type cell wall

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily
IPR001764 Glycoside hydrolase, family 3, N-terminal
IPR017853 Glycoside hydrolase superfamily
IPR026891 Fibronectin type III-like domain
IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily
IPR044993 Beta-D-xylosidase
IPR013783 Immunoglobulin-like fold
IPR002772 Glycoside hydrolase family 3 C-terminal domain
Mapman id Description
21.3.2.2.4.2 Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL)