Gene: Pp3c1_39760
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c1_39760
- Transcript Identifier Pp3c1_39760V3.3
- Gene Type Coding gene
- Location Chr01 : 27727444-27730575 : positive
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D000028
- #Genes/#Species 3637/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c1_39760V3.3
- pacid 32967313
- alias Phpat.001G158400
- alias Pp1s163_69V6
- uniprot A9T4G0
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045944 | IEA | GOA Database | positive regulation of transcription by RNA polymerase II | |
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
| GO:0010152 | ISO | PLAZA Integrative Orthology | pollen maturation | AT1G22130 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT1G22130 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT1G77980 |
| GO:0080092 | ISO | PLAZA Integrative Orthology | regulation of pollen tube growth | AT1G22130 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046983 | IEA | GOA Database | protein dimerization activity | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0000977 | IEA | GOA Database | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0003700 | ISO | PLAZA Homology (enrichment) | DNA-binding transcription factor activity | HOM05D000042 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G22130 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G77950 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |