Gene: Pp3c19_18240
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c19_18240
- Transcript Identifier Pp3c19_18240V3.2
- Gene Type Coding gene
- Location Chr19 : 11979189-11982667 : positive
Gene Family Information
- ID HOM05D002622
- #Genes/#Species 261/97
- Phylogenetic origin
- ID ORTHO05D002837
- #Genes/#Species 258/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c19_18240V3.2
- pacid 32939719
- alias Pp1s172_68V6
- alias Phypa_88654
- uniprot A9T6B5
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006357 | IBA IEA | GOA Database | regulation of transcription by RNA polymerase II | |
| GO:0006357 | IEA | InterPro | regulation of transcription by RNA polymerase II | |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT5G14960 |
| GO:0032876 | ISO | PLAZA Integrative Orthology | negative regulation of DNA endoreduplication | AT3G48160 |
| GO:0042023 | ISO | PLAZA Integrative Orthology | DNA endoreduplication | AT3G48160 |
| GO:0008284 | ISO | PLAZA Integrative Orthology | positive regulation of cell population proliferation | AT5G14960 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0007049 | IEA | GOA Database | cell cycle |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G48160 |
| GO:0000978 | IBA IEA | GOA Database | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
| GO:0000978 | IEA | InterPro | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
| GO:0000981 | IBA | GOA Database | DNA-binding transcription factor activity, RNA polymerase II-specific | |
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G01330 |
| GO:0090575 | IBA | GOA Database | RNA polymerase II transcription regulator complex | |
| GO:0005667 | IEA | GOA Database | transcription regulator complex | |
| GO:0005667 | IEA | InterPro | transcription regulator complex | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |