Gene: AT3G48160
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G48160
- Transcript Identifier AT3G48160.2
- Gene Type Coding gene
- Location Chr3 : 17783641-17785846 : positive
Gene Family Information
- ID HOM05D002622
- #Genes/#Species 261/97
- Phylogenetic origin
- ID ORTHO05D002837
- #Genes/#Species 258/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G48160.2
- symbol DEL1
- Alias E2FE,E2L3,E2F-LIKE 3
- uniprot Q8LSZ4
Descriptions
- Description DP-E2F-like 1
- Computational description DP-E2F-like 1 (DEL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 1181 Blast hits to 868 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 721; Fungi - 9; Plants - 301; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).
- Computational description DP-E2F-like 1 (DEL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 1182 Blast hits to 869 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 9; Plants - 301; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006357 | IEA | GOA Database | regulation of transcription by RNA polymerase II | |
GO:0006357 | IBA | Gene Ontology | regulation of transcription by RNA polymerase II | 1 |
GO:0006357 | IEA | InterPro | regulation of transcription by RNA polymerase II | |
GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
GO:0007049 | IEA | GOA Database | cell cycle | |
GO:0032876 | IGI | Gene Ontology | negative regulation of DNA endoreduplication | 2 |
GO:0042023 | IMP | Gene Ontology | DNA endoreduplication | 3 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000978 | IEA | GOA Database | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
GO:0000978 | IBA | Gene Ontology | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1 |
GO:0000978 | IEA | InterPro | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
GO:0003677 | IEA | GOA Database | DNA binding | |
GO:0003677 | IDA | Gene Ontology | DNA binding | 4 |
GO:0000981 | IBA | Gene Ontology | DNA-binding transcription factor activity, RNA polymerase II-specific | 1 |
GO:0005515 | IPI | Gene Ontology | protein binding | 5 |
GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 6 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | IDA ISM | Gene Ontology | nucleus | 4 |
GO:0005667 | IEA | GOA Database | transcription regulator complex | |
GO:0005667 | IEA | InterPro | transcription regulator complex | |
GO:0090575 | IBA | Gene Ontology | RNA polymerase II transcription regulator complex | 1 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |