Gene: AT3G01330
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G01330
- Transcript Identifier AT3G01330.1
- Gene Type Coding gene
- Location Chr3 : 124596-126805 : negative
Gene Family Information
- ID HOM05D002622
- #Genes/#Species 261/97
- Phylogenetic origin
- ID ORTHO05D002837
- #Genes/#Species 258/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G01330.1
- symbol DEL3
- Alias E2FF,E2L2,E2F-LIKE 2
- uniprot Q8RWL0
Descriptions
- Description DP-E2F-like protein 3
- Computational description DP-E2F-like protein 3 (DEL3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like 2 (TAIR:AT5G14960.1); Has 1046 Blast hits to 870 proteins in 117 species: Archae - 0; Bacteria - 4; Metazoa - 638; Fungi - 7; Plants - 262; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006357 | IEA | GOA Database | regulation of transcription by RNA polymerase II | |
| GO:0006357 | IBA | Gene Ontology | regulation of transcription by RNA polymerase II | 1 |
| GO:0006357 | IEA | InterPro | regulation of transcription by RNA polymerase II | |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0007049 | IEA | GOA Database | cell cycle |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000978 | IEA | GOA Database | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
| GO:0000978 | IBA | Gene Ontology | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1 |
| GO:0000978 | IEA | InterPro | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IDA | Gene Ontology | DNA binding | 2 |
| GO:0000981 | IBA | Gene Ontology | DNA-binding transcription factor activity, RNA polymerase II-specific | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 2 |
| GO:0005667 | IEA | GOA Database | transcription regulator complex | |
| GO:0005667 | IEA | InterPro | transcription regulator complex | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IDA | Gene Ontology | cytoplasm | 2 |
| GO:0090575 | IBA | Gene Ontology | RNA polymerase II transcription regulator complex | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |