Gene: Pp3c14_10320
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c14_10320
- Transcript Identifier Pp3c14_10320V3.1
- Gene Type Coding gene
- Location Chr14 : 6548794-6550490 : positive
Gene Family Information
- ID HOM05D000578
- #Genes/#Species 962/99
- Phylogenetic origin
- ID ORTHO05D000422
- #Genes/#Species 952/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c14_10320V3.1
- pacid 32962642
- alias Phpat.014G037400
- alias Phypa_110694
- alias Pp1s509_13V6
- uniprot A9U4E4
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009641 | ISO | PLAZA Integrative Orthology | shade avoidance | AT1G75540 |
| GO:0010100 | ISO | PLAZA Integrative Orthology | negative regulation of photomorphogenesis | AT2G31380 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT4G39070 |
| GO:0010117 | ISO | PLAZA Integrative Orthology | photoprotection | AT1G75540 |
| GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT1G06040 |
| GO:2000306 | ISO | PLAZA Integrative Orthology | positive regulation of photomorphogenesis | AT4G39070 |
| GO:0009718 | ISO | PLAZA Integrative Orthology | anthocyanin-containing compound biosynthetic process | AT1G78600 |
| GO:0048573 | ISO | PLAZA Integrative Orthology | photoperiodism, flowering | AT1G06040 |
| GO:1902448 | ISO | PLAZA Integrative Orthology | positive regulation of shade avoidance | AT1G06040 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT1G78600 |
| GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT1G06040 |
| GO:1900458 | ISO | PLAZA Integrative Orthology | negative regulation of brassinosteroid mediated signaling pathway | AT4G39070 |
| GO:0009741 | ISO | PLAZA Integrative Orthology | response to brassinosteroid | AT4G39070 |
| GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT4G39070 |
| GO:0090351 | ISO | PLAZA Integrative Orthology | seedling development | AT1G06040 |
| GO:1905157 | ISO | PLAZA Integrative Orthology | positive regulation of photosynthesis | AT1G75540 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT1G06040 |
| GO:0010099 | ISO | PLAZA Integrative Orthology | regulation of photomorphogenesis | AT1G78600 |
| GO:0015995 | ISO | PLAZA Integrative Orthology | chlorophyll biosynthetic process | AT1G78600 |
| GO:0006355 | IBA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0009640 | IBA | GOA Database | photomorphogenesis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003712 | ISO | PLAZA Integrative Orthology | transcription coregulator activity | AT1G06040 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G75540 |
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G75540 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016607 | ISO | PLAZA Integrative Orthology | nuclear speck | AT1G78600 |
| GO:0005634 | IBA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000315 | B-box-type zinc finger |
| Mapman id | Description |
|---|---|
| 15.5.1.1 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-DBB) |