Gene: AT1G75540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G75540
  • Transcript Identifier AT1G75540.1
  • Gene Type Coding gene
  • Location Chr1 : 28366059-28367398 : positive

Gene Family Information

  • ID HOM05D000578
  • #Genes/#Species 962/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G75540.1
  • symbol BBX21
  • Alias AtBBX21,B BOX 21,LHUS,long hypocotyl under shade,STH2,salt tolerance homolog2
  • full_name B-box domain protein 21
  • uniprot Q9LQZ7

Descriptions

  • Description salt tolerance homolog2
  • Computational description salt tolerance homolog2 (STH2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT4G39070.1); Has 3177 Blast hits to 2249 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 43; Plants - 2068; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009641
IMP, IGI
Gene Ontologyshade avoidance1 2
GO:0006355
IMP
IBA
Gene Ontologyregulation of transcription, DNA-templated2 3
GO:0010117
IMP
Gene Ontologyphotoprotection4
GO:1905157
IMP
Gene Ontologypositive regulation of photosynthesis4
GO:0009640
IBA
Gene Ontologyphotomorphogenesis3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity5
GO:0005515
IPI
Gene Ontologyprotein binding6
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding7
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000315 B-box-type zinc finger
Mapman id Description
15.5.1.1 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-DBB)