Gene: AT4G39070

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G39070
  • Transcript Identifier AT4G39070.1
  • Gene Type Coding gene
  • Location Chr4 : 18205061-18206421 : negative

Gene Family Information

  • ID HOM05D000578
  • #Genes/#Species 962/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G39070.1
  • symbol BZS1
  • Alias BBX20,B-box domain protein 20
  • uniprot Q0IGM7

Descriptions

  • Description B-box zinc finger family protein
  • Computational description B-box zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to karrikin, response to chitin, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: salt tolerance homolog2 (TAIR:AT1G75540.1); Has 1892 Blast hits to 1305 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1793; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010200
IEP
GOA Databaseresponse to chitin
GO:0080167
IEP
GOA Databaseresponse to karrikin
GO:0006355
IBA
TAS
Gene Ontologyregulation of transcription, DNA-templated1 2
GO:0009640
IBA
Gene Ontologyphotomorphogenesis2
GO:2000306
IDA
Gene Ontologypositive regulation of photomorphogenesis3
GO:1900458
IDA
Gene Ontologynegative regulation of brassinosteroid mediated signaling pathway3
GO:0009741
IEP
Gene Ontologyresponse to brassinosteroid4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding5
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000315 B-box-type zinc finger
Mapman id Description
15.5.1.1 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-DBB)