Gene: Potri.008G114900

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.008G114900
  • Transcript Identifier Potri.008G114900.4
  • Gene Type Coding gene
  • Location Chr08 : 7330144-7334694 : positive

Gene Family Information

  • ID HOM05D001835
  • #Genes/#Species 357/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.008G114900.v4.1
  • pacid 42807851
  • synonym estExt_fgenesh4_pg.C_LG_VIII1015

Descriptions

  • Description K18749 - protein LSM14 (LSM14, RAP55, SCD6)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031087
ISO
PLAZA Integrative Orthologydeadenylation-independent decapping of nuclear-transcribed mRNA AT1G26110
GO:0010606
ISO
PLAZA Integrative Orthologypositive regulation of cytoplasmic mRNA processing body assembly AT1G26110
GO:0033962
ISO
PLAZA Integrative OrthologyP-body assembly AT1G26110
GO:0017148
ISO
PLAZA Integrative Orthologynegative regulation of translation AT1G26110

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT1G26110
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G26110
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G26110

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT1G26110
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G26110

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019050 FDF domain
IPR010920 LSM domain superfamily
IPR025609 Lsm14-like, N-terminal
Mapman id Description
35.1 not assigned.annotated