Gene: AT1G26110
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G26110
- Transcript Identifier AT1G26110.1
- Gene Type Coding gene
- Location Chr1 : 9024616-9027556 : negative
Gene Family Information
- ID HOM05D001835
- #Genes/#Species 357/100
- Phylogenetic origin
- ID ORTHO05D001899
- #Genes/#Species 340/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G26110.1
- symbol DCP5
- uniprot Q9C658
Descriptions
- Description decapping 5
- Computational description decapping 5 (DCP5); CONTAINS InterPro DOMAIN/s: DFDF motif (InterPro:IPR019050), FFD/TFG box motif (InterPro:IPR019053); BEST Arabidopsis thaliana protein match is: decapping 5-like (TAIR:AT5G45330.1); Has 46741 Blast hits to 20189 proteins in 1086 species: Archae - 36; Bacteria - 10029; Metazoa - 17132; Fungi - 5632; Plants - 6968; Viruses - 649; Other Eukaryotes - 6295 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006417 | IEA | GOA Database | regulation of translation | |
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0033962 | IMP IBA | Gene Ontology | P-body assembly | 1 2 |
| GO:0034063 | IBA | Gene Ontology | stress granule assembly | 2 |
| GO:0031087 | IMP | Gene Ontology | deadenylation-independent decapping of nuclear-transcribed mRNA | 1 |
| GO:0017148 | IMP | Gene Ontology | negative regulation of translation | 1 |
| GO:0010606 | IMP | Gene Ontology | positive regulation of cytoplasmic mRNA processing body assembly | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IDA, HDA IBA | Gene Ontology | mRNA binding | 2 3 4 |
| GO:0042803 | IDA | Gene Ontology | protein homodimerization activity | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0000932 | IEA | GOA Database | P-body | |
| GO:0000932 | IDA IBA | Gene Ontology | P-body | 1 2 |
| GO:1990124 | IBA | Gene Ontology | messenger ribonucleoprotein complex | 2 |
| GO:0005634 | HDA ISM | Gene Ontology | nucleus | 5 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.4.2.2.3 | RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA decapping complex.regulatory component DCP5 |