Gene: PSO063G2829

General Information

Structural Information

  • Species Papaver somniferum
  • Gene Identifier PSO063G2829
  • Transcript Identifier PSO063G2829.01
  • Gene Type Coding gene
  • Location NC_039364.1 : 14866674-14868588 : positive

Gene Family Information

  • ID HOM05D003015
  • #Genes/#Species 229/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna-XM_026541791.1
  • pid XP_026397576.1
  • id gene-LOC113293009

Descriptions

  • product zinc finger CCCH domain-containing protein 40-like
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G07360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0046872
IEA
InterPrometal ion binding
GO:0003723
IEA
InterProRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G29580
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G07060
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G29580

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G07360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR000571 Zinc finger, CCCH-type
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR039171 Pre-mRNA-splicing factor Cwc2/Slt11
IPR036855 Zinc finger, CCCH-type superfamily
Mapman id Description
16.2.5.2.1 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component MAC5