Gene: PSO017G4615

General Information

Structural Information

  • Species Papaver somniferum
  • Gene Identifier PSO017G4615
  • Transcript Identifier PSO017G4615.01
  • Gene Type Coding gene
  • Location NC_039362.1 : 111551168-111554257 : negative

Gene Family Information

  • ID HOM05D003327
  • #Genes/#Species 205/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna-XM_026531417.1
  • pid XP_026387202.1
  • id gene-LOC113282424

Descriptions

  • product protein STABILIZED1-like
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0006396
IEA
InterProRNA processing
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT4G03430
GO:2000636
ISO
PLAZA Integrative Orthologypositive regulation of primary miRNA processing AT4G03430
GO:0080188
ISO
PLAZA Integrative Orthologygene silencing by RNA-directed DNA methylation AT4G03430
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT4G03430
GO:2000630
ISO
PLAZA Integrative Orthologypositive regulation of miRNA metabolic process AT4G03430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G03430
GO:0015030
ISO
PLAZA Integrative OrthologyCajal body AT4G03430
GO:0005681
ISO
PLAZA Integrative Orthologyspliceosomal complex AT4G03430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR010491 PRP1 splicing factor, N-terminal
IPR019734 Tetratricopeptide repeat
IPR029071 Ubiquitin-like domain superfamily
IPR003107 HAT (Half-A-TPR) repeat
IPR045075 Pre-mRNA-splicing factor Syf1-like
IPR000626 Ubiquitin-like domain
IPR027108 Pre-mRNA-processing factor 6/Prp1/STA1
Mapman id Description
16.2.1.4.5 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (PRPF6/PRP1/STA1)