Gene: PRCOL_00000936

General Information

Structural Information

  • Species Prasinoderma coloniale
  • Gene Identifier PRCOL_00000936
  • Transcript Identifier PRCOL_00000936-RA
  • Gene Type Coding gene
  • Location Chr1 : 3218112-3219983 : positive

Gene Family Information

  • ID HOM05D000684
  • #Genes/#Species 835/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid PRCOL_00000936-RA

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT5G52250
GO:0010114
ISO
PLAZA Integrative Orthologyresponse to red light AT2G46340
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT2G46340
GO:0010100
ISO
PLAZA Integrative Orthologynegative regulation of photomorphogenesis AT2G46340
GO:0010017
ISO
PLAZA Integrative Orthologyred or far-red light signaling pathway AT2G46340
GO:0048575
ISO
PLAZA Integrative Orthologyshort-day photoperiodism, flowering AT2G46340
GO:0010119
ISO
PLAZA Integrative Orthologyregulation of stomatal movement AT2G32950
GO:0010218
ISO
PLAZA Integrative Orthologyresponse to far red light AT2G46340
GO:0009649
ISO
PLAZA Integrative Orthologyentrainment of circadian clock AT2G32950
GO:0046283
ISO
PLAZA Integrative Orthologyanthocyanin-containing compound metabolic process AT2G32950
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT2G32950
GO:0009647
ISO
PLAZA Integrative Orthologyskotomorphogenesis AT2G32950
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G46340
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT2G46340
GO:0009641
ISO
PLAZA Integrative Orthologyshade avoidance AT2G32950
GO:0043254
ISO
PLAZA Integrative Orthologyregulation of protein-containing complex assembly AT5G52250
GO:0009585
ISO
PLAZA Integrative Orthologyred, far-red light phototransduction AT2G46340
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT2G46340
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT2G32950

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT2G32950
GO:0005515
IEA
InterProprotein binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT2G46340
GO:0061630
IEA
InterProubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G46340
GO:0000152
ISO
PLAZA Integrative Orthologynuclear ubiquitin ligase complex AT2G32950
GO:0016604
ISO
PLAZA Integrative Orthologynuclear body AT2G46340

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR042755 E3 ubiquitin-protein ligase COP1
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
Mapman id Description
35.1 not assigned.annotated