Gene: AT2G46340

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G46340
  • Transcript Identifier AT2G46340.1
  • Gene Type Coding gene
  • Location Chr2 : 19022572-19026821 : negative

Gene Family Information

  • ID HOM05D000684
  • #Genes/#Species 835/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G46340.1
  • symbol SPA1
  • full_name SUPPRESSOR OF PHYA-105 1
  • uniprot Q9SYX2

Descriptions

  • Description SPA (suppressor of phyA-105) protein family
  • Computational description SUPPRESSOR OF PHYA-105 1 (SPA1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 31438 Blast hits to 19748 proteins in 684 species: Archae - 32; Bacteria - 4770; Metazoa - 12431; Fungi - 6743; Plants - 3442; Viruses - 2; Other Eukaryotes - 4018 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009637
IDA, IMP
Gene Ontologyresponse to blue light1 2
GO:0009640
IEA
GOA Databasephotomorphogenesis
GO:0009640
IMP
Gene Ontologyphotomorphogenesis3
GO:0009640
IEA
InterProphotomorphogenesis
GO:0010017
IEA
GOA Databasered or far-red light signaling pathway
GO:0010017
IMP
Gene Ontologyred or far-red light signaling pathway4
GO:0009585
IEA
GOA Databasered, far-red light phototransduction
GO:0009585
IGI
Gene Ontologyred, far-red light phototransduction5
GO:0009658
IMP
Gene Ontologychloroplast organization6
GO:2000028
IDA, IMP
Gene Ontologyregulation of photoperiodism, flowering7 8
GO:0010218
IEP
Gene Ontologyresponse to far red light9
GO:0010114
IEP
Gene Ontologyresponse to red light9
GO:0010100
IMP
Gene Ontologynegative regulation of photomorphogenesis10
GO:0048575
IMP
Gene Ontologyshort-day photoperiodism, flowering11
GO:0006468
IEA
Gene Ontologyprotein phosphorylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding12
GO:0005515
IEA
InterProprotein binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0004672
IEA
Gene Ontologyprotein kinase activity
GO:0042802
IPI
Gene Ontologyidentical protein binding13

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus3
GO:0016607
IEA
GOA Databasenuclear speck
GO:0016605
IEA
GOA DatabasePML body
GO:0016604
IDA
Gene Ontologynuclear body2
GO:0080008
ISS
Gene OntologyCul4-RING E3 ubiquitin ligase complex14

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
IPR044630 WD-repeat protein SPA1/2/3/4
IPR036322 WD40-repeat-containing domain superfamily
IPR011009 Protein kinase-like domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
19.2.2.8.3.4.4.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.substrate adaptor activities.COP1-SPA substrate adaptor subcomplex.regulator component SPA
26.1.1.3.2 External stimuli response.light.red/far red light.substrate adaptor module of CUL4-DDB1 ubiquitin ligase complex.regulator component SPA