Gene: PGSC0003DMG401019061
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG401019061
- Transcript Identifier PGSC0003DMT400049051
- Gene Type Coding gene
- Location ST4.03ch11 : 31439429-31448077 : negative
Gene Family Information
- ID HOM05D005117
- #Genes/#Species 147/95
- Phylogenetic origin
- ID ORTHO05D005956
- #Genes/#Species 149/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pacid 37467211
- id PGSC0003DMG401019061.v4.03
- uniprot M1BN69
Descriptions
- Description Ligatin
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006413 | IEA | GOA Database | translational initiation | |
| GO:0006413 | IEA | InterPro | translational initiation | |
| GO:0001731 | IBA IEA | GOA Database | formation of translation preinitiation complex | |
| GO:0001731 | IEA | InterPro | formation of translation preinitiation complex |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003743 | IBA IEA | GOA Database | translation initiation factor activity | |
| GO:0003743 | IEA | InterPro | translation initiation factor activity | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036885 | SWIB/MDM2 domain superfamily |
| IPR041366 | Pre-PUA domain |
| IPR036877 | SUI1 domain superfamily |
| IPR001950 | SUI1 domain |
| IPR039757 | Eukaryotic translation initiation factor 2D |
| IPR039759 | Eukaryotic translation initiation factor 2D, SUI1 domain |
| IPR015947 | PUA-like superfamily |
| IPR004521 | Uncharacterised domain CHP00451 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |