Gene: PGSC0003DMG401002053

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG401002053
Transcript Identifier PGSC0003DMT400005205
Gene Type Coding gene
Location ST4.03ch12 : 55874814-55879451 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000583
#Genes/#Species 954/96
Phylogenetic origin

ID ORTHO05D000442
#Genes/#Species 922/96
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

pacid 37448276
id PGSC0003DMG401002053.v4.03
uniprot M0ZPL9

Descriptions

Short descriptions
Ortholog descriptions

Description Lyase

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005975	IEA	GOA Database	carbohydrate metabolic process
GO:0005975	IEA	InterPro	carbohydrate metabolic process

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003824	IEA	GOA Database	catalytic activity
GO:0003824	IEA	InterPro	catalytic activity
GO:0030246	IEA	GOA Database	carbohydrate binding
GO:0030246	IEA	InterPro	carbohydrate binding
GO:0102210	IEA	GOA Database	rhamnogalacturonan endolyase activity
GO:0016829	IEA	GOA Database	lyase activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005576	IEA	GOA Database	extracellular region
GO:0005774	ISO	PLAZA Integrative Orthology	vacuolar membrane	AT4G24430

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011013	Galactose mutarotase-like domain superfamily
IPR029411	Rhamnogalacturonan lyase, domain III
IPR008979	Galactose-binding-like domain superfamily
IPR014718	Glycoside hydrolase-type carbohydrate-binding
IPR010325	Rhamnogalacturonate lyase
IPR029413	Rhamnogalacturonan lyase, domain II
IPR013784	Carbohydrate-binding-like fold

Mapman id	Description
35.1	not assigned.annotated