Gene: PGSC0003DMG400025998

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400025998
  • Transcript Identifier PGSC0003DMT400066877
  • Gene Type Coding gene
  • Location ST4.03ch01 : 69201116-69206213 : negative

Gene Family Information

  • ID HOM05D001429
  • #Genes/#Species 440/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37437943
  • id PGSC0003DMG400025998.v4.03
  • uniprot M1CGC1

Descriptions

  • Description Nuclear RNA binding protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071472
ISO
PLAZA Integrative Orthologycellular response to salt stress AT4G16830
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT4G16830
GO:0071470
ISO
PLAZA Integrative Orthologycellular response to osmotic stress AT4G16830
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT4G16830
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT4G16830
GO:0009787
ISO
PLAZA Integrative Orthologyregulation of abscisic acid-activated signaling pathway AT4G16830

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003729
IBA
GOA DatabasemRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT4G17520
GO:0048471
ISO
PLAZA Integrative Orthologyperinuclear region of cytoplasm AT4G16830
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G17520
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G47210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039764 RNA binding protein HABP4/SERBP1
IPR006861 Hyaluronan/mRNA-binding protein
IPR019084 Stm1-like, N-terminal
Mapman id Description
35.1 not assigned.annotated