Gene: PGSC0003DMG400022496

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400022496
  • Transcript Identifier PGSC0003DMT400057924
  • Gene Type Coding gene
  • Location ST4.03ch01 : 75754068-75754631 : positive

Gene Family Information

  • ID HOM05D004362
  • #Genes/#Species 164/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37438815
  • id PGSC0003DMG400022496.v4.03
  • uniprot M1C1W8

Descriptions

  • Description 60S ribosome subunit biogenesis protein NIP7
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042255
IEA
GOA Databaseribosome assembly
GO:0042255
IEA
InterProribosome assembly
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0042273
IBA
GOA Databaseribosomal large subunit biogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G15770

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0005730
IBA
IEA
GOA Databasenucleolus
GO:0030687
IBA
GOA Databasepreribosome, large subunit precursor
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G15770

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016686 Ribosome biogenesis factor, NIP7
IPR036974 PUA domain superfamily
IPR002478 PUA domain
IPR015947 PUA-like superfamily
IPR040598 UPF0113, pre-PUA domain
IPR005155 UPF0113, PUA domain
Mapman id Description
35.1 not assigned.annotated