Gene: PGSC0003DMG400019995
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400019995
- Transcript Identifier PGSC0003DMT400051474
- Gene Type Coding gene
- Location ST4.03ch00 : 459564-459881 : negative
Gene Family Information
- ID HOM05D005418
- #Genes/#Species 141/99
- Phylogenetic origin
- ID ORTHO05D006724
- #Genes/#Species 139/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37429466
- id PGSC0003DMG400019995.v4.03
- uniprot M1BRT2
Descriptions
- Description Protein SSU72
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0006397 | IEA | InterPro | mRNA processing | |
| GO:0070940 | IBA | GOA Database | dephosphorylation of RNA polymerase II C-terminal domain | |
| GO:0006369 | IBA | GOA Database | termination of RNA polymerase II transcription | |
| GO:0006378 | IBA | GOA Database | mRNA polyadenylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004721 | IEA | GOA Database | phosphoprotein phosphatase activity | |
| GO:0004721 | IEA | InterPro | phosphoprotein phosphatase activity | |
| GO:0106306 | IEA | GOA Database | protein serine phosphatase activity | |
| GO:0106307 | IEA | GOA Database | protein threonine phosphatase activity | |
| GO:0004722 | IEA | GOA Database | protein serine/threonine phosphatase activity | |
| GO:0008420 | IBA | GOA Database | RNA polymerase II CTD heptapeptide repeat phosphatase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G73820 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0005847 | IBA | GOA Database | mRNA cleavage and polyadenylation specificity factor complex | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G73820 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006811 | RNA polymerase II subunit A |
| Mapman id | Description |
|---|---|
| 16.3.1.2.10 | RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.phosphatase component Ssu72 |
| 18.4.24.3 | Protein modification.phosphorylation.protein tyrosine phosphatase (PTP) superfamily.PTP phosphatase (SSU72) |