Gene: AT1G73820

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G73820
  • Transcript Identifier AT1G73820.2
  • Gene Type Coding gene
  • Location Chr1 : 27755740-27757402 : negative

Gene Family Information

  • ID HOM05D005418
  • #Genes/#Species 141/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G73820.2
  • uniprot Q9C9T0

Descriptions

  • Description Ssu72-like family protein
  • Computational description Ssu72-like family protein; FUNCTIONS IN: phosphoprotein phosphatase activity; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II subunit A (InterPro:IPR006811); Has 454 Blast hits to 453 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi - 149; Plants - 48; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
Gene OntologymRNA processing
GO:0006397
IEA
InterPromRNA processing
GO:0006470
IEA
GOA Databaseprotein dephosphorylation
GO:0070940
IBA
Gene Ontologydephosphorylation of RNA polymerase II C-terminal domain1
GO:0006369
IBA
Gene Ontologytermination of RNA polymerase II transcription1
GO:0006378
IBA
Gene OntologymRNA polyadenylation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008420
IBA
Gene OntologyRNA polymerase II CTD heptapeptide repeat phosphatase activity1
GO:0004721
IEA
GOA Databasephosphoprotein phosphatase activity
GO:0004721
IEA
InterProphosphoprotein phosphatase activity
GO:0004722
IEA
GOA Databaseprotein serine/threonine phosphatase activity
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0106307
IEA
Gene Ontologyprotein threonine phosphatase activity
GO:0106306
IEA
Gene Ontologyprotein serine phosphatase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast3
GO:0005847
IBA
Gene OntologymRNA cleavage and polyadenylation specificity factor complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006811 RNA polymerase II subunit A
Mapman id Description
16.3.1.2.10 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.phosphatase component Ssu72
18.4.24.3 Protein modification.phosphorylation.protein tyrosine phosphatase (PTP) superfamily.PTP phosphatase (SSU72)