Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400019995 Solanum tuberosum HOM05D005418 ORTHO05D006724 4.8e-57 224.2 106 100.0
Solyc03g097990.3 Solanum lycopersicum HOM05D005418 ORTHO05D006724 2.7e-47 191.8 99 90.9
Sopen03g028700 Solanum pennellii HOM05D005418 ORTHO05D006724 2.7e-47 191.8 99 90.9
PGSC0003DMG400033680 Solanum tuberosum HOM05D005418 ORTHO05D006724 2.7e-47 191.8 99 90.9
CAN.G637.36 Capsicum annuum HOM05D005418 ORTHO05D006724 3.2e-45 184.9 99 85.9
Peaxi162Scf00171g00918 Petunia axillaris HOM05D005418 ORTHO05D006724 6.1e-44 180.6 99 84.8
Migut.D01215 Erythranthe guttata HOM05D005418 ORTHO05D006724 1.8e-43 179.1 99 82.8
MD14G1240000 Malus domestica HOM05D005418 ORTHO05D006724 3.0e-43 178.3 99 82.8
SalBow1G6390 Salvia bowleyana HOM05D005418 ORTHO05D006724 4.0e-43 177.9 99 82.8
MSTRG.9356 Avicennia marina HOM05D005418 ORTHO05D006724 2.6e-42 175.3 99 80.8
PSO210G6190 Papaver somniferum HOM05D005418 ORTHO05D006724 2.6e-42 175.3 99 79.8
Potri.015G036600 Populus trichocarpa HOM05D005418 ORTHO05D006724 3.4e-42 174.9 97 83.5
TAR365G0064 Trochodendron aralioides HOM05D005418 ORTHO05D006724 3.4e-42 174.9 99 81.8
THA.LOC104812146 Tarenaya hassleriana HOM05D005418 ORTHO05D006724 4.4e-42 174.5 98 82.7
Gohir.A05G289300 Gossypium hirsutum HOM05D005418 ORTHO05D006724 5.7e-42 174.1 99 80.8
Gohir.D05G290700 Gossypium hirsutum HOM05D005418 ORTHO05D006724 5.7e-42 174.1 99 80.8
Gorai.009G305700 Gossypium raimondii HOM05D005418 ORTHO05D006724 5.7e-42 174.1 99 80.8
COL.COLO4_07665 Corchorus olitorius HOM05D005418 ORTHO05D006724 7.5e-42 173.7 99 79.8
DCAR_011383 Daucus carota HOM05D000073 ORTHO05D000033 7.5e-42 173.7 99 81.8
Aa31LG4G11570 Aethionema arabicum HOM05D005418 ORTHO05D006724 9.8e-42 173.3 109 77.1
Cc04_g09290 Coffea canephora HOM05D005418 ORTHO05D006724 9.8e-42 173.3 99 79.8
FvH4_5g17750 Fragaria vesca HOM05D005418 ORTHO05D006724 1.3e-41 172.9 99 79.8
FAN08G1767 Fragaria x ananassa HOM05D005418 ORTHO05D006724 1.3e-41 172.9 99 79.8
FAN13G2408 Fragaria x ananassa HOM05D005418 ORTHO05D006724 1.3e-41 172.9 99 79.8
FAN18G2901 Fragaria x ananassa HOM05D005418 ORTHO05D006724 1.3e-41 172.9 99 79.8
CSS0002924 Camellia sinensis var. sinensis HOM05D005418 ORTHO05D006724 1.7e-41 172.6 99 79.8
COL.COLO4_34153 Corchorus olitorius HOM05D005418 ORTHO05D006724 1.7e-41 172.6 99 78.8
SGA_v2.0_scaffold40G15645 Striga asiatica HOM05D005418 ORTHO05D006724 1.7e-41 172.6 99 80.8
GSVIVG01037420001 Vitis vinifera HOM05D005418 ORTHO05D006724 2.2e-41 172.2 99 79.8
Atru.chr9.1604 Acer truncatum HOM05D005418 ORTHO05D006724 2.8e-41 171.8 99 78.8
Aqoxy5G00519 Aquilegia oxysepala HOM05D005418 ORTHO05D006724 2.8e-41 171.8 99 79.8
Aqoxy6G02988 Aquilegia oxysepala HOM05D005418 ORTHO05D006724 2.8e-41 171.8 99 79.8
AL2G33630 Arabidopsis lyrata HOM05D005418 ORTHO05D006724 2.8e-41 171.8 99 81.8
BcaC08g45620 Brassica carinata HOM05D005418 ORTHO05D006724 2.8e-41 171.8 99 82.8
A07p29640 Brassica napus HOM05D005418 ORTHO05D006724 2.8e-41 171.8 99 82.8
BraA07t30605Z Brassica rapa HOM05D005418 ORTHO05D006724 2.8e-41 171.8 99 82.8
Thhalv10019100m.g Eutrema salsugineum HOM05D005418 ORTHO05D006724 2.8e-41 171.8 99 81.8
Prupe.5G237600 Prunus persica HOM05D005418 ORTHO05D006724 2.8e-41 171.8 99 80.8
arahy.Tifrunner.gnm1.ann1.20VKS9 Arachis hypogaea HOM05D005418 ORTHO05D006724 3.7e-41 171.4 99 79.8
CARHR066900 Cardamine hirsuta HOM05D005418 ORTHO05D006724 3.7e-41 171.4 99 81.8
Duzib128G1895 Durio zibethinus HOM05D005418 ORTHO05D006724 3.7e-41 171.4 99 78.8
TWI15G1138 Tripterygium wilfordii HOM05D005418 ORTHO05D006724 4.9e-41 171.0 100 78.0
AT1G73820 Arabidopsis thaliana HOM05D005418 ORTHO05D006724 6.3e-41 170.6 99 80.8
Manes.06G002300 Manihot esculenta HOM05D005418 ORTHO05D006724 6.3e-41 170.6 99 78.8
BcaB03g15730 Brassica carinata HOM05D005418 ORTHO05D006724 8.3e-41 170.2 99 81.8
C06p33820 Brassica napus HOM05D005418 ORTHO05D006724 8.3e-41 170.2 99 81.8
BolC6t38495H Brassica oleracea HOM05D005418 ORTHO05D006724 8.3e-41 170.2 99 81.8
TWI60G0409 Tripterygium wilfordii HOM05D005418 ORTHO05D006724 8.3e-41 170.2 98 78.6
vmacro17855 Vaccinium macrocarpon HOM05D005418 ORTHO05D006724 8.3e-41 170.2 99 77.8
Carub.0002s2057 Capsella rubella HOM05D005418 ORTHO05D006724 1.1e-40 169.9 99 80.8
Sabra15G0031100 Salix brachista HOM05D005418 ORTHO05D006724 1.1e-40 169.9 96 81.2
Sp5g29010 Schrenkiella parvula HOM05D005418 ORTHO05D006724 1.1e-40 169.9 99 80.8
PGR102G0744 Punica granatum HOM05D005418 ORTHO05D006724 1.4e-40 169.5 99 76.8
RcHm_v2.0_Chr7g0177871 Rosa chinensis HOM05D005418 ORTHO05D006724 1.4e-40 169.5 99 78.8
Thecc.10G098100 Theobroma cacao HOM05D005418 ORTHO05D006724 1.4e-40 169.5 99 77.8
Cpa.g.sc64.48 Carica papaya HOM05D005418 ORTHO05D006724 1.8e-40 169.1 99 78.8
CDE12G0113 Ceratophyllum demersum HOM05D005418 ORTHO05D006724 2.4e-40 168.7 100 77.0
Manes.14G173200 Manihot esculenta HOM05D005418 ORTHO05D006724 2.4e-40 168.7 99 77.8
Sabra15G0030200 Salix brachista HOM05D005418 ORTHO05D006724 2.4e-40 168.7 101 78.2
Cfa005619 Carpinus fangiana HOM05D005418 ORTHO05D006724 3.1e-40 168.3 99 76.8
Ca_25975_v3 Cicer arietinum L. HOM05D005418 ORTHO05D006724 3.1e-40 168.3 99 77.8
Lalb_Chr22g0353611 Lupinus albus HOM05D005418 ORTHO05D006724 3.1e-40 168.3 99 78.8
PSO832G3604 Papaver somniferum HOM05D005418 ORTHO05D006724 3.1e-40 168.3 96 79.2
QL10p031782 Quercus lobata HOM05D005418 ORTHO05D006724 3.1e-40 168.3 99 77.8
Ciclev10005966m.g Citrus clementina HOM05D005418 ORTHO05D006724 4.1e-40 167.9 97 78.4
Lsat_1_v5_gn_2_11960 Lactuca sativa HOM05D005418 ORTHO05D006724 4.1e-40 167.9 99 76.8
Lj2g0014184 Lotus japonicus HOM05D005418 ORTHO05D006724 4.1e-40 167.9 99 76.8
Nitab4.5_0000430g0100 Nicotiana tabacum HOM05D005418 ORTHO05D006724 4.1e-40 167.9 119 70.6
Nitab4.5_0006110g0060 Nicotiana tabacum HOM05D005418 ORTHO05D006724 4.1e-40 167.9 119 70.6
ATR0827G099 Amborella trichopoda HOM05D005418 ORTHO05D006724 5.4e-40 167.5 99 75.8
CiPaw.15G148000 Carya illinoinensis HOM05D005418 ORTHO05D006724 5.4e-40 167.5 99 76.8
Psat1g028800 Pisum sativum HOM05D005418 ORTHO05D006724 5.4e-40 167.5 99 77.8
unitig_899.g14817 Utricularia gibba HOM05D005418 ORTHO05D006724 5.4e-40 167.5 99 77.8
Medtr0332s0040 Medicago truncatula HOM05D005418 ORTHO05D006724 7.0e-40 167.2 99 77.8
TPR.G14843 Trifolium pratense HOM05D005418 ORTHO05D006724 7.0e-40 167.2 99 77.8
Actinidia09063 Actinidia chinensis HOM05D005418 ORTHO05D006724 9.2e-40 166.8 99 76.8
CANSAT78G1374 Cannabis sativa HOM05D005418 ORTHO05D006724 9.2e-40 166.8 99 76.8
HanXRQChr14g0431131 Helianthus annuus HOM05D005418 ORTHO05D006724 9.2e-40 166.8 99 76.8
Hund01906 Selenicereus undatus HOM05D005418 ORTHO05D006724 9.2e-40 166.8 105 76.2
MELO3C001923.2 Cucumis melo HOM05D005418 ORTHO05D006724 1.6e-39 166.0 97 78.4
CsaV3_1G004910 Cucumis sativus L. HOM05D005418 ORTHO05D006724 1.6e-39 166.0 97 78.4
SHI12596 Sapria himalayana HOM05D005418 ORTHO05D006724 1.6e-39 166.0 98 76.5
MBI17_g10951_MAGBIO Magnolia biondii HOM05D005418 ORTHO05D006724 2.0e-39 165.6 97 78.4
Nn1g06291 Nelumbo nucifera HOM05D005418 ORTHO05D006724 2.0e-39 165.6 99 76.8
Glyma.07G106200 Glycine max HOM05D005418 ORTHO05D006724 2.7e-39 165.2 99 75.8
SEGI_01195 Sequoiadendron giganteum HOM05D005418 ORTHO05D006724 2.7e-39 165.2 99 74.7
CDE11G0106 Ceratophyllum demersum HOM05D005418 ORTHO05D006724 3.5e-39 164.9 96 79.2
Mapoly0058s0033 Marchantia polymorpha HOM05D005418 ORTHO05D006724 3.5e-39 164.9 98 78.6
ECA238G0283 Erigeron canadensis HOM05D005418 ORTHO05D006724 4.5e-39 164.5 99 75.8
arahy.Tifrunner.gnm1.ann1.XQM4JL Arachis hypogaea HOM05D005418 ORTHO05D006724 7.8e-39 163.7 99 78.8
Rhsim08G0113500 Rhododendron simsii HOM05D005418 ORTHO05D006724 7.8e-39 163.7 96 78.1
Sed0019275 Sechium edule HOM05D005418 ORTHO05D006724 7.8e-39 163.7 97 76.3
Actinidia06835 Actinidia chinensis HOM05D005418 ORTHO05D006724 1.0e-38 163.3 98 75.5
Phvul.004G147300 Phaseolus vulgaris HOM05D005418 ORTHO05D006724 1.0e-38 163.3 99 74.7
VMungo0464G1360 Vigna mungo HOM05D005418 ORTHO05D006724 1.7e-38 162.5 99 74.7
Haze_15514 Corylus avellana HOM05D005418 ORTHO05D006724 3.8e-38 161.4 96 76.0
MBI17_g45323_MAGBIO Magnolia biondii HOM05D005418 ORTHO05D006724 3.8e-38 161.4 94 78.7
Os12g0168200 Oryza sativa ssp. japonica HOM05D005418 ORTHO05D006724 3.8e-38 161.4 99 71.7
HPP92_026203 Vanilla planifolia HOM05D005418 ORTHO05D006724 3.8e-38 161.4 99 74.7
Zm00001eb139180 Zea mays HOM05D005418 ORTHO05D006724 1.1e-37 159.8 99 71.7
MD06G1233000 Malus domestica HOM05D005418 ORTHO05D006724 5.6e-37 157.5 97 75.3
Pp3c24_6390 Physcomitrium patens HOM05D005418 ORTHO05D006724 1.2e-36 156.4 97 72.2
Pp3c8_14260 Physcomitrium patens HOM05D005418 ORTHO05D006724 4.7e-36 154.5 98 71.4
ClCG04G012830 Citrullus lanatus HOM05D005418 ORTHO05D006724 6.1e-36 154.1 117 65.0
CBR_g52356 Chara braunii HOM05D005418 ORTHO05D006724 1.8e-35 152.5 99 73.7
Pp3c23_19050 Physcomitrium patens HOM05D005418 ORTHO05D006724 2.3e-35 152.1 98 69.4
AUR62036432 Chenopodium quinoa HOM05D005418 ORTHO05D006724 5.2e-35 151.0 115 65.2
Thhalv10019803m.g Eutrema salsugineum HOM05D005418 ORTHO05D006724 1.2e-34 149.8 99 75.8
SMO232G0125 Selaginella moellendorffii HOM05D005418 ORTHO05D006724 9.8e-34 146.7 98 68.4
Lj9C416T2 Lonicera japonica HOM05D005418 ORTHO05D006724 2.9e-33 145.2 99 71.7
Hma1.2p1_0471F.1_g159370 Hydrangea macrophylla HOM05D005418 ORTHO05D006724 4.1e-32 141.4 97 70.1
Cre02.g145300 Chlamydomonas reinhardtii HOM05D005418 ORTHO05D006724 2.3e-27 125.6 99 59.6
CDE01G0467 Ceratophyllum demersum HOM05D005418 ORTHO05D006724 1.1e-24 116.7 69 75.4
MCO08G311 Micromonas commoda HOM05D005418 ORTHO05D006724 3.0e-22 108.6 98 55.1
PRCOL_00006990 Prasinoderma coloniale HOM05D005418 ORTHO05D006724 3.3e-21 105.1 99 51.5
HPP92_016144 Vanilla planifolia HOM05D005418 ORTHO05D006724 3.1e-19 98.6 63 71.4
A07p39670 Brassica napus HOM05D005418 ORTHO05D006724 7.5e-18 94.0 64 71.9
BraA07t31516Z Brassica rapa HOM05D005418 ORTHO05D006724 7.5e-18 94.0 64 71.9
EL10Ac4g07599 Beta vulgaris HOM05D005418 ORTHO05D006724 4.9e-17 91.3 52 80.8
Cfa023691 Carpinus fangiana HOM05D005418 ORTHO05D006724 6.4e-17 90.9 116 43.1
Oeu036611.1 Olea europaea HOM05D005418 ORTHO05D006724 6.4e-17 90.9 51 80.4
AUR62017076 Chenopodium quinoa HOM05D005418 ORTHO05D006724 1.9e-16 89.4 51 80.4
Dinv09075 Davidia involucrata HOM05D005418 ORTHO05D006724 2.1e-15 85.9 50 74.0
EL10Ac4g07600 Beta vulgaris HOM05D005418 ORTHO05D006724 4.6e-15 84.7 52 73.1
Ah.06g181320 Amaranthus hybridus HOM05D005418 ORTHO05D006724 6.0e-15 84.3 49 75.5
AagrBONN_evm.TU.Sc2ySwM_344.1040 Anthoceros agrestis HOM05D005418 ORTHO05D006724 6.0e-15 84.3 54 68.5
BcaC08g46801 Brassica carinata HOM05D005418 ORTHO05D006724 6.0e-15 84.3 49 77.6
C06p47960 Brassica napus HOM05D005418 ORTHO05D006724 6.0e-15 84.3 49 77.6
BolC6t39831H Brassica oleracea HOM05D005418 ORTHO05D006724 6.0e-15 84.3 49 77.6
Sc12g0008760 Simmondsia chinensis HOM05D005418 ORTHO05D006724 5.6e-13 77.8 45 73.3
Thhalv10019340m.g Eutrema salsugineum HOM05D005418 ORTHO05D006724 2.1e-12 75.9 43 83.7
Sc12g0008750 Simmondsia chinensis HOM05D005418 ORTHO05D006724 2.1e-12 75.9 43 76.7
COL.COLO4_34165 Corchorus olitorius HOM05D005418 ORTHO05D006724 3.6e-12 75.1 53 69.8
Dinv09076 Davidia involucrata HOM05D005418 ORTHO05D006724 1.1e-11 73.6 43 79.1
COL.COLO4_07708 Corchorus olitorius HOM05D005418 ORTHO05D006724 1.4e-11 73.2 52 69.2
Sabra15G0030300 Salix brachista HOM05D005418 ORTHO05D012650 1.8e-11 72.8 40 85.0
COL.COLO4_32865 Corchorus olitorius HOM05D005418 ORTHO05D006724 3.2e-08 62.0 30 86.7


User provided reference genes

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