Gene: PGSC0003DMG400012400

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400012400
  • Transcript Identifier PGSC0003DMT400032277
  • Gene Type Coding gene
  • Location ST4.03ch07 : 52930025-52933767 : positive

Gene Family Information

  • ID HOM05D006724
  • #Genes/#Species 119/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37432595
  • id PGSC0003DMG400012400.v4.03
  • uniprot M1AX51

Descriptions

  • Description Uncharacterized exonuclease domain-containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000467
IBA
GOA Databaseexonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0035194
ISO
PLAZA Integrative Orthologypost-transcriptional gene silencing by RNA AT3G15140
GO:0090065
ISO
PLAZA Integrative Orthologyregulation of production of siRNA involved in RNA interference AT3G15140

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0000175
IBA
GOA Database3'-5'-exoribonuclease activity
GO:0016891
ISO
PLAZA Integrative Orthologyendoribonuclease activity, producing 5'-phosphomonoesters AT3G15140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G15140

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036397 Ribonuclease H superfamily
IPR012337 Ribonuclease H-like superfamily
IPR013520 Exonuclease, RNase T/DNA polymerase III
Mapman id Description
16.11.1.6 RNA processing.organelle machinery.ribonuclease activities.exoribonuclease (ERIL)