Gene: PGSC0003DMG400006150

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400006150
  • Transcript Identifier PGSC0003DMT400015741
  • Gene Type Coding gene
  • Location ST4.03ch07 : 44395560-44402616 : negative

Gene Family Information

  • ID HOM05D005691
  • #Genes/#Species 136/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37431948
  • id PGSC0003DMG400006150.v4.03
  • uniprot M1A6H4

Descriptions

  • Description Nucleoporin
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006606
IBA
GOA Databaseprotein import into nucleus
GO:0000972
IBA
GOA Databasetranscription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0016973
IBA
GOA Databasepoly(A)+ mRNA export from nucleus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017056
IBA
IEA
GOA Databasestructural constituent of nuclear pore
GO:0017056
IEA
InterProstructural constituent of nuclear pore
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0031080
IBA
GOA Databasenuclear pore outer ring

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037624 Nuclear pore complex protein Nup133-like
IPR014908 Nucleoporin, Nup133/Nup155-like, N-terminal
IPR007187 Nucleoporin, Nup133/Nup155-like, C-terminal
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
23.5.1.1.1.3 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (NUP133)