Gene: PGR142G4089

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR142G4089
  • Transcript Identifier PGR142G4089.01
  • Gene Type Coding gene
  • Location NC_045128.1 : 15712145-15733327 : negative

Gene Family Information

  • ID HOM05D003986
  • #Genes/#Species 175/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031378118.1
  • name LOC116193526
  • name XM_031522258.1
  • id gene-LOC116193526
  • uniprot A0A6P8C6K2

Descriptions

  • product THO complex subunit 2, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0006397
IEA
InterPromRNA processing
GO:0006406
IEA
GOA DatabasemRNA export from nucleus
GO:0006406
IEA
InterPromRNA export from nucleus
GO:0035196
ISO
PLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNA AT1G24706
GO:1990428
ISO
PLAZA Integrative OrthologymiRNA transport AT1G24706

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT1G24706

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000347
IEA
GOA DatabaseTHO complex
GO:0000347
IEA
InterProTHO complex
GO:0005634
IEA
GOA Databasenucleus
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G24706

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040007 THO complex subunit 2
IPR032302 THO complex subunit 2, N-terminal domain
IPR021726 THO complex, subunitTHOC2, N-terminal
IPR021418 THO complex, subunitTHOC2, C-terminal
Mapman id Description
16.10.1.1.2 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.THO subcomplex.component THOC2/Tho2