Gene: PGR142G3926

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR142G3926
  • Transcript Identifier PGR142G3926.02
  • Gene Type Coding gene
  • Location NC_045128.1 : 43507499-43514588 : positive

Gene Family Information

  • ID HOM05D005579
  • #Genes/#Species 138/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031382997.1
  • name LOC116197112
  • name XM_031527137.1
  • id gene-LOC116197112
  • uniprot A0A6P8CFZ9

Descriptions

  • product protein SHORTAGE IN CHIASMATA 1, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007131
IEA
GOA Databasereciprocal meiotic recombination
GO:0007131
IEA
InterProreciprocal meiotic recombination
GO:0000712
ISO
PLAZA Integrative Orthologyresolution of meiotic recombination intermediates AT5G52290

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G52290

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os02g0642600
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G52290
GO:0005694
ISO
PLAZA Integrative Orthologychromosome Os02g0642600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038824 Protein shortage in chiasmata 1-like
Mapman id Description
13.3.5.5.1.4.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.SHOC1-PTD heterodimer.endonuclease component SHOC1/ZIP2