Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3926 Punica granatum HOM05D005579 ORTHO05D006775 0.0e+00 3248.4 1632 100.0
Cfa008319 Carpinus fangiana HOM05D005579 ORTHO05D006775 0.0e+00 1081.2 1680 41.5
TAR367G0001 Trochodendron aralioides HOM05D005579 ORTHO05D006775 5.5e-301 1038.5 1670 39.8
CiPaw.04G071000 Carya illinoinensis HOM05D005579 ORTHO05D006775 7.9e-300 1034.6 1671 40.8
QL09p014220 Quercus lobata HOM05D005579 ORTHO05D006775 1.6e-292 1010.4 1484 42.3
Ciclev10006492m.g Citrus clementina HOM05D005579 ORTHO05D006775 1.0e-291 1007.7 1671 40.6
Duzib068G1336 Durio zibethinus HOM05D005579 ORTHO05D006775 2.2e-289 1000.0 1691 39.1
Dinv28443 Davidia involucrata HOM05D005579 ORTHO05D006775 4.2e-277 959.1 1421 42.2
Gohir.D12G259200 Gossypium hirsutum HOM05D005579 ORTHO05D006775 1.6e-276 957.2 1791 37.3
COL.COLO4_14309 Corchorus olitorius HOM05D005579 ORTHO05D006775 2.2e-270 936.8 1692 38.5
Gorai.008G277600 Gossypium raimondii HOM05D005579 ORTHO05D006775 1.8e-267 927.2 1766 36.8
GSVIVG01028977001 Vitis vinifera HOM05D005579 ORTHO05D006775 2.2e-265 920.2 1584 39.3
Gohir.A12G257850 Gossypium hirsutum HOM05D005579 ORTHO05D006775 1.7e-262 910.6 1742 37.7
Cpa.g.sc107.52 Carica papaya HOM05D005579 ORTHO05D006775 1.6e-260 904.0 1680 37.4
TWI23G0169 Tripterygium wilfordii HOM05D005579 ORTHO05D006775 8.9e-259 898.3 1583 38.4
Sed0022815 Sechium edule HOM05D005579 ORTHO05D006775 1.9e-248 864.0 1698 37.3
Nn6g33500 Nelumbo nucifera HOM05D005579 ORTHO05D006775 9.5e-245 851.7 1689 36.4
Thecc.03G176600 Theobroma cacao HOM05D005579 ORTHO05D006775 3.1e-243 846.7 1681 36.5
ClCG09G012930 Citrullus lanatus HOM05D005579 ORTHO05D006775 5.4e-240 835.9 1738 36.4
CsaV3_3G049940 Cucumis sativus L. HOM05D005579 ORTHO05D006775 9.2e-240 835.1 1710 37.3
VMungo0464G1636 Vigna mungo HOM05D005579 ORTHO05D006775 3.6e-236 823.2 1659 35.3
Glyma.09G139400 Glycine max HOM05D005579 ORTHO05D006775 2.2e-233 813.9 1647 35.3
Lj2g0003134 Lotus japonicus HOM05D005579 ORTHO05D006775 4.9e-233 812.8 1685 35.8
AL8G26680 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 9.2e-232 808.5 1702 35.4
Sopen03g004630 Solanum pennellii HOM05D005579 ORTHO05D006775 3.9e-230 803.1 1688 35.5
Phvul.004G117000 Phaseolus vulgaris HOM05D005579 ORTHO05D006775 9.6e-229 798.5 1677 35.5
Peaxi162Scf00444g00841 Petunia axillaris HOM05D005579 ORTHO05D006775 1.2e-228 798.1 1723 34.6
AL271U10020 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 8.1e-228 795.4 1738 35.0
AT5G52290 Arabidopsis thaliana HOM05D005579 ORTHO05D006775 2.0e-226 790.8 1703 35.2
Solyc03g025820.3 Solanum lycopersicum HOM05D005579 ORTHO05D006775 6.4e-225 785.8 1694 35.6
Sp6g14550 Schrenkiella parvula HOM05D005579 ORTHO05D006775 1.9e-221 774.2 1704 34.6
CSS0047196 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 5.6e-221 772.7 1180 41.9
CSS0017636 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 8.1e-220 768.8 1192 41.4
Actinidia32860 Actinidia chinensis HOM05D005579 ORTHO05D006775 6.9e-219 765.8 1630 35.4
Carub.0008s1239 Capsella rubella HOM05D005579 ORTHO05D006775 9.0e-219 765.4 1702 34.5
Thhalv10015364m.g Eutrema salsugineum HOM05D005579 ORTHO05D006775 3.4e-218 763.5 1711 34.1
CARHR265270 Cardamine hirsuta HOM05D005579 ORTHO05D006775 5.8e-218 762.7 1700 33.8
Nitab4.5_0009681g0030 Nicotiana tabacum HOM05D005579 ORTHO05D006775 8.4e-217 758.8 1691 35.6
CAN.G490.30 Capsicum annuum HOM05D005579 ORTHO05D006775 1.4e-216 758.1 1481 36.1
Nitab4.5_0000716g0010 Nicotiana tabacum HOM05D005579 ORTHO05D006775 1.9e-216 757.7 1687 35.2
THA.LOC104800252 Tarenaya hassleriana HOM05D005579 ORTHO05D006775 1.3e-214 751.5 1697 33.6
MELO3C003322.2 Cucumis melo HOM05D005579 ORTHO05D006775 2.3e-214 750.7 1687 35.7
Aa31LG3G8710 Aethionema arabicum HOM05D005579 ORTHO05D006775 3.0e-214 750.4 1695 34.3
TPR.G10740 Trifolium pratense HOM05D005579 ORTHO05D006775 1.1e-213 748.4 1755 33.9
BcaB01g04199 Brassica carinata HOM05D005579 ORTHO05D006775 8.1e-212 742.3 1718 34.7
C03p18410 Brassica napus HOM05D005579 ORTHO05D006775 1.7e-209 734.6 1711 33.9
A03p15740 Brassica napus HOM05D005579 ORTHO05D006775 3.2e-208 730.3 1688 33.8
BcaC01g06176 Brassica carinata HOM05D005579 ORTHO05D006775 2.7e-207 727.2 1714 33.6
Cc02_g02990 Coffea canephora HOM05D005579 ORTHO05D006775 2.3e-206 724.2 1496 36.2
Sc13g0008650 Simmondsia chinensis HOM05D005579 ORTHO05D006775 1.1e-205 721.8 1505 35.6
Psat0s2227g0080 Pisum sativum HOM05D005579 ORTHO05D006775 5.6e-205 719.5 1730 33.0
BraA03t10864Z Brassica rapa HOM05D005579 ORTHO05D006775 1.8e-203 714.5 1744 32.7
Prupe.2G294300 Prunus persica HOM05D005579 ORTHO05D006775 2.4e-203 714.1 1678 33.6
BolC3t14238H Brassica oleracea HOM05D005579 ORTHO05D006775 3.4e-202 710.3 1773 32.9
Medtr6g045357 Medicago truncatula HOM05D005579 ORTHO05D006775 5.8e-202 709.5 1614 35.1
EL10Ac3g05643 Beta vulgaris HOM05D005579 ORTHO05D006775 1.5e-197 694.9 1749 31.7
Ah.07g207210 Amaranthus hybridus HOM05D005579 ORTHO05D006775 4.5e-194 683.3 1724 32.3
FvH4_7g29470 Fragaria vesca HOM05D005579 ORTHO05D006775 1.3e-193 681.8 1668 34.2
Potri.012G141100 Populus trichocarpa HOM05D005579 ORTHO05D006775 2.1e-191 674.5 1682 32.9
RcHm_v2.0_Chr1g0377251 Rosa chinensis HOM05D005579 ORTHO05D006775 2.3e-190 671.0 1670 33.9
FAN01G1040 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.2e-186 658.7 1709 32.9
Sabra12G0106200 Salix brachista HOM05D005579 ORTHO05D006775 1.5e-186 658.3 1687 32.7
FAN03G0333 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.0e-186 657.9 1708 33.0
MD07G1268700 Malus domestica HOM05D005579 ORTHO05D006775 2.2e-185 654.4 1683 32.4
DCAR_018198 Daucus carota HOM05D005579 ORTHO05D006775 6.5e-185 652.9 1720 31.3
FAN03G0790 Fragaria x ananassa HOM05D005579 ORTHO05D006775 6.1e-183 646.4 1692 33.4
Manes.06G147100 Manihot esculenta HOM05D005579 ORTHO05D006775 1.3e-180 638.6 1651 32.6
FAN06G0670 Fragaria x ananassa HOM05D005579 ORTHO05D006775 3.1e-179 634.0 1743 32.0
CANSAT21G2370 Cannabis sativa HOM05D005579 ORTHO05D006775 8.5e-177 625.9 1671 32.0
FAN06G0715 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.7e-172 611.7 1660 31.9
Rhsim03G0180800 Rhododendron simsii HOM05D005579 ORTHO05D006775 3.6e-167 594.0 1676 32.0
MBI17_g46332_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 1.4e-163 582.0 1157 35.7
Atru.chr1.458 Acer truncatum HOM05D005579 ORTHO05D006775 4.7e-159 567.0 787 45.2
Hma1.2p1_0270F.1_g108020 Hydrangea macrophylla HOM05D005579 ORTHO05D006775 8.0e-159 566.2 832 43.3
Haze_13712 Corylus avellana HOM05D005579 ORTHO05D006775 5.4e-155 553.5 733 47.3
Eucgr.L01677 Eucalyptus grandis HOM05D005579 ORTHO05D006775 7.0e-155 553.1 655 49.9
Migut.F00340 Erythranthe guttata HOM05D005579 ORTHO05D006775 5.4e-139 500.4 1675 29.8
ECA232G1470 Erigeron canadensis HOM05D005579 ORTHO05D006775 2.8e-135 488.0 1644 29.1
PSO782G1268 Papaver somniferum HOM05D005579 ORTHO05D006775 4.7e-135 487.3 1647 29.1
PSO063G6446 Papaver somniferum HOM05D005579 ORTHO05D006775 8.9e-134 483.0 1654 28.4
SalBow4G2278 Salvia bowleyana HOM05D005579 ORTHO05D006775 1.2e-133 482.6 1717 29.2
FAN10G2011 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.6e-133 481.5 1264 33.0
SalBow4G1821 Salvia bowleyana HOM05D005579 ORTHO05D006775 2.6e-133 481.5 1717 29.1
SGA_v2.0_scaffold60G21038 Striga asiatica HOM05D005579 ORTHO05D006775 1.1e-131 476.1 1675 28.7
Os02g0642600 Oryza sativa ssp. japonica HOM05D005579 ORTHO05D006775 3.3e-128 464.5 1805 27.4
MBI17_g39341_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 1.8e-126 458.8 981 35.7
Zm00001eb248620 Zea mays HOM05D005579 ORTHO05D006775 9.2e-123 446.4 1844 26.9
Lalb_Chr19g0130861 Lupinus albus HOM05D005579 ORTHO05D006775 1.7e-121 442.2 1466 28.8
Oeu056255.1 Olea europaea HOM05D005579 ORTHO05D006775 4.4e-117 427.6 939 33.1
AUR62021193 Chenopodium quinoa HOM05D005579 ORTHO05D006775 1.6e-114 419.1 1578 28.3
Lsat_1_v5_gn_9_55980 Lactuca sativa HOM05D005579 ORTHO05D006775 4.7e-111 407.5 1663 27.0
AUR62015985 Chenopodium quinoa HOM05D005579 ORTHO05D006775 2.4e-110 405.2 1626 27.6
Haze_13711 Corylus avellana HOM05D005579 ORTHO05D006775 4.0e-110 404.4 697 37.2
PGSC0003DMG400014341 Solanum tuberosum HOM05D005579 ORTHO05D006775 6.6e-105 387.1 667 39.4
arahy.Tifrunner.gnm1.ann1.TEHT7Q Arachis hypogaea HOM05D005579 ORTHO05D006775 1.9e-104 385.6 652 40.8
HPP92_008526 Vanilla planifolia HOM05D005579 ORTHO05D006775 5.3e-102 377.5 641 38.1
arahy.Tifrunner.gnm1.ann1.Q0IWYL Arachis hypogaea HOM05D005579 ORTHO05D006775 2.9e-100 371.7 653 39.5
HanXRQChr15g0495541 Helianthus annuus HOM05D005579 ORTHO05D006775 5.4e-99 367.5 650 40.6
MD01G1200800 Malus domestica HOM05D005579 ORTHO05D006775 6.2e-95 354.0 791 35.3
ATR0680G156 Amborella trichopoda HOM05D005579 ORTHO05D006775 1.5e-77 296.2 833 30.5
SHI39775 Sapria himalayana HOM05D005579 ORTHO05D006775 1.9e-75 289.3 692 32.9
FAN10G0535 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.0e-73 283.5 502 40.2
unitig_37.g12526 Utricularia gibba HOM05D005579 ORTHO05D006775 2.3e-57 229.2 580 34.8
Mapoly0013s0198 Marchantia polymorpha HOM05D005579 ORTHO05D006775 5.2e-49 201.4 721 26.4
CDE08G0179 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 6.7e-49 201.1 576 32.8
Hund11748 Selenicereus undatus HOM05D005579 ORTHO05D006775 1.1e-46 193.7 503 32.8
Actinidia34112 Actinidia chinensis HOM05D005579 ORTHO05D006775 5.3e-46 191.4 160 61.9
Ca_25744_v3 Cicer arietinum L. HOM05D005579 ORTHO05D006775 1.4e-41 176.8 475 31.6
SMO364G0179 Selaginella moellendorffii HOM05D005579 ORTHO05D006775 2.6e-40 172.6 234 38.9
Pp3c13_14750 Physcomitrium patens HOM05D005579 ORTHO05D006775 1.4e-33 150.2 226 36.3
CDE08G1090 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 2.4e-30 139.4 615 27.6
Pp3c21_13440 Physcomitrium patens HOM05D005579 ORTHO05D006775 9.2e-30 137.5 233 32.6
Hund11747 Selenicereus undatus HOM05D005579 ORTHO05D006775 2.9e-28 132.5 216 37.0
TAR375G0314 Trochodendron aralioides HOM05D005579 ORTHO05D006775 7.0e-22 111.3 219 34.2
MBI17_g46331_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 4.6e-21 108.6 167 41.3
MD01G1200900 Malus domestica HOM05D005579 ORTHO05D006775 5.9e-21 108.2 281 31.7
SEGI_30883 Sequoiadendron giganteum HOM05D005579 ORTHO05D006775 5.9e-21 108.2 483 23.8
Dinv28442 Davidia involucrata HOM05D005579 ORTHO05D006775 9.2e-14 84.3 238 33.2
Haze_13709 Corylus avellana HOM05D005579 ORTHO05D006775 3.3e-11 75.9 166 38.0
TPR.G17624 Trifolium pratense HOM05D005579 ORTHO05D006775 4.4e-08 65.5 146 32.2
QL09p014214 Quercus lobata HOM05D005579 ORTHO05D006775 4.9e-07 62.0 197 27.9
FAN06G4680 Fragaria x ananassa HOM05D005579 ORTHO05D006775 8.3e-07 61.2 199 29.1
CBR_g61457 Chara braunii HOM05D005579 ORTHO05D006775 2.4e-06 59.7 144 27.1


User provided reference genes

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