Gene: Os02g0642600

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os02g0642600
  • Transcript Identifier Os02t0642600-01
  • Gene Type Coding gene
  • Location chr02 : 25806233-25813410 : negative

Gene Family Information

  • ID HOM05D005579
  • #Genes/#Species 138/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os02t0642600-01
  • MSU-ID LOC_Os02g42910.1
  • symbol OsSHOC1
  • name Shortage in chiasmata 1
  • uniprot B9F1C0

Descriptions

  • Description Meiotic component, Regulation of crossover formation
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0051321
IEA
GOA Databasemeiotic cell cycle
GO:0007131
IMP
IEA
GOA Databasereciprocal meiotic recombination
GO:0007131
IEA
InterProreciprocal meiotic recombination
GO:0000712
ISO
PLAZA Integrative Orthologyresolution of meiotic recombination intermediates AT5G52290

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
GOA Databaseprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005694
IDA
IEA
GOA Databasechromosome
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005634
IDA
IEA
GOA Databasenucleus
GO:0016020
IEA
GOA Databasemembrane
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G52290

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038824 Protein shortage in chiasmata 1-like
Mapman id Description
13.3.5.5.1.4.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.SHOC1-PTD heterodimer.endonuclease component SHOC1/ZIP2