Gene: PGR142G1976
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR142G1976
- Transcript Identifier PGR142G1976.01
- Gene Type Coding gene
- Location NC_045128.1 : 38057197-38065096 : negative
Gene Family Information
- ID HOM05D004852
- #Genes/#Species 152/97
- Phylogenetic origin
- ID ORTHO05D006128
- #Genes/#Species 147/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031381989.1
- name LOC116196424
- name XM_031526129.1
- id gene-LOC116196424
- uniprot A0A6P8CFX5
Descriptions
- product DNA repair protein REV1, transcript variant X1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | GOA Database | DNA repair | |
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0042276 | IEA | GOA Database | error-prone translesion synthesis | |
| GO:0042276 | IEA | InterPro | error-prone translesion synthesis | |
| GO:0071897 | IEA | GOA Database | DNA biosynthetic process | |
| GO:0006974 | IEA | GOA Database | cellular response to DNA damage stimulus | |
| GO:0010224 | ISO | PLAZA Integrative Orthology | response to UV-B | AT5G44750 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003684 | IEA | GOA Database | damaged DNA binding | |
| GO:0003684 | IEA | InterPro | damaged DNA binding | |
| GO:0016779 | IEA | GOA Database | nucleotidyltransferase activity | |
| GO:0016779 | IEA | InterPro | nucleotidyltransferase activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0003887 | ISO | PLAZA Integrative Orthology | DNA-directed DNA polymerase activity | AT5G44750 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001126 | UmuC domain |
| IPR036775 | DNA polymerase, Y-family, little finger domain superfamily |
| IPR036420 | BRCT domain superfamily |
| IPR024728 | DNA polymerase type-Y, HhH motif |
| IPR001357 | BRCT domain |
| IPR017961 | DNA polymerase, Y-family, little finger domain |
| IPR012112 | DNA repair protein Rev1 |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| Mapman id | Description |
|---|---|
| 14.2.5 | DNA damage response.DNA repair polymerase activities.DNA polymerase (REV1) |