Gene: PGR142G0662

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR142G0662
  • Transcript Identifier PGR142G0662.01
  • Gene Type Coding gene
  • Location NC_045128.1 : 42288981-42292336 : positive

Gene Family Information

  • ID HOM05D001534
  • #Genes/#Species 415/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031383343.1
  • name LOC116197362
  • name XM_031527483.1
  • id gene-LOC116197362
  • uniprot A0A218WS29

Descriptions

  • product transcription initiation factor TFIID subunit 6
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006367
IEA
GOA Databasetranscription initiation from RNA polymerase II promoter
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter
GO:0006352
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0009860
ISO
PLAZA Integrative Orthologypollen tube growth AT1G04950

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
GOA Databaseprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0016251
IEA
GOA DatabaseRNA polymerase II general transcription initiation factor activity
GO:0016251
IEA
InterProRNA polymerase II general transcription initiation factor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G04950

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000124
IEA
GOA DatabaseSAGA complex
GO:0000124
IEA
InterProSAGA complex
GO:0005669
IEA
GOA Databasetranscription factor TFIID complex
GO:0005669
IEA
InterProtranscription factor TFIID complex
GO:0046695
IEA
GOA DatabaseSLIK (SAGA-like) complex
GO:0046695
IEA
InterProSLIK (SAGA-like) complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009072 Histone-fold
IPR037796 Transcription initiation factor TFIID subunit 6
IPR004823 TATA box binding protein associated factor (TAF)
IPR011442 TAF6, C-terminal HEAT repeat domain
IPR016024 Armadillo-type fold
Mapman id Description
15.3.4.1.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TAF module shared with SAGA/TFIId complexes.component TAF6