Gene: PGR044G1683

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR044G1683
  • Transcript Identifier PGR044G1683.01
  • Gene Type Coding gene
  • Location NC_045134.1 : 9349738-9350935 : negative

Gene Family Information

  • ID HOM05D002682
  • #Genes/#Species 256/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031372032.1
  • name LOC116187474
  • name XM_031516172.1
  • id gene-LOC116187474
  • uniprot A0A6P8BQD5

Descriptions

  • product serine/arginine-rich splicing factor RSZ22A-like, transcript variant X2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT4G31580

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT1G23860
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G24590
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G24590

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G23860
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT4G31580
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G24590
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G24590

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR001878 Zinc finger, CCHC-type
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR036875 Zinc finger, CCHC-type superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
16.2.6.4 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RSZ21/22)