Gene: AT2G24590

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G24590
  • Transcript Identifier AT2G24590.1
  • Gene Type Coding gene
  • Location Chr2 : 10449837-10450860 : positive

Gene Family Information

  • ID HOM05D002682
  • #Genes/#Species 256/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G24590.1
  • symbol RSZ22a
  • Alias At-RSZ22a,RS-containing zinc finger protein 22a
  • full_name RS-containing zinc finger protein 22a
  • uniprot Q9SJA6

Descriptions

  • Description RNA recognition motif and CCHC-type zinc finger domains containing protein
  • Computational description RNA recognition motif and CCHC-type zinc finger domains containing protein; FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: serine/arginine-rich 22 (TAIR:AT4G31580.2); Has 11952 Blast hits to 10510 proteins in 739 species: Archae - 6; Bacteria - 805; Metazoa - 6109; Fungi - 1395; Plants - 2528; Viruses - 91; Other Eukaryotes - 1018 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0008380
NAS
Gene OntologyRNA splicing1
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0000398
IBA
Gene OntologymRNA splicing, via spliceosome2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003723
IBA
Gene OntologyRNA binding2
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0003729
IDA
Gene OntologymRNA binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005829
IDA
GOA Databasecytosol
GO:0005730
IDA
GOA Databasenucleolus
GO:0005730
HDA
Gene Ontologynucleolus5
GO:0016607
IBA
Gene Ontologynuclear speck2
GO:0005773
HDA
Gene Ontologyvacuole6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR001878 Zinc finger, CCHC-type
IPR035979 RNA-binding domain superfamily
IPR036875 Zinc finger, CCHC-type superfamily
Mapman id Description
16.2.6.4 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RSZ21/22)