Gene: Os06g0646600

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os06g0646600
  • Transcript Identifier Os06t0646600-01
  • Gene Type Coding gene
  • Location chr06 : 26411997-26414732 : negative

Gene Family Information

  • ID HOM05D001212
  • #Genes/#Species 516/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os06t0646600-01
  • MSU-ID LOC_Os06g43860.1
  • MSU-ID LOC_Os06g43860.2
  • MSU-ID LOC_Os06g43860.4
  • uniprot Q94LW4

Descriptions

  • Description Similar to Homeobox protein knotted-1-like 11.
  • Description Similar to cDNA, clone: J065162G03, full insert sequence.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0009727
ISO
PLAZA Integrative Orthologydetection of ethylene stimulus AT4G32040
GO:0071369
ISO
PLAZA Integrative Orthologycellular response to ethylene stimulus AT4G32040
GO:0071345
ISO
PLAZA Integrative Orthologycellular response to cytokine stimulus AT5G25220
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT5G25220
GO:0009722
ISO
PLAZA Integrative Orthologydetection of cytokinin stimulus AT5G25220

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G25220

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G25220

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR001356 Homeobox domain
IPR005541 KNOX2
IPR005539 ELK domain
IPR005540 KNOX1
IPR008422 Homeobox KN domain
Mapman id Description
15.5.3.4 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (KNOX)