Gene: Os05g0408900

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os05g0408900
  • Transcript Identifier Os05t0408900-03
  • Gene Type Coding gene
  • Location chr05 : 19957424-19962883 : negative

Gene Family Information

  • ID HOM05D001154
  • #Genes/#Species 535/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os05t0408900-03
  • MSU-ID LOC_Os05g33840.1
  • uniprot O22567

Descriptions

  • Description Similar to 1-deoxy-D-xylulose-5-phosphate synthase.
  • Description Similar to 1-D-deoxyxylulose 5-phosphate synthase.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016114
IEA
GOA Databaseterpenoid biosynthetic process
GO:0016114
IEA
InterProterpenoid biosynthetic process
GO:0019288
ISO
PLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway AT4G15560
GO:0015995
IBA
GOA Databasechlorophyll biosynthetic process
GO:0052865
IEA
GOA Database1-deoxy-D-xylulose 5-phosphate biosynthetic process
GO:0009228
IEA
GOA Databasethiamine biosynthetic process
GO:0008299
IEA
GOA Databaseisoprenoid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G15560
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT4G15560
GO:0008661
IEA
GOA Database1-deoxy-D-xylulose-5-phosphate synthase activity
GO:0008661
IEA
InterPro1-deoxy-D-xylulose-5-phosphate synthase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016744
IBA
GOA Databasetransketolase or transaldolase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IBA
IEA
GOA Databasechloroplast
GO:0009536
IEA
GOA Databaseplastid
GO:0009570
IEA
GOA Databasechloroplast stroma

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II
IPR005475 Transketolase-like, pyrimidine-binding domain
IPR005477 Deoxyxylulose-5-phosphate synthase
IPR029061 Thiamin diphosphate-binding fold
IPR033248 Transketolase, C-terminal domain
Mapman id Description
9.1.2.2 Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.1-deoxy-D-xylulose 5-phosphate synthase (DXS)