Gene: Os02g0682200
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os02g0682200
- Transcript Identifier Os02t0682200-01
- Gene Type Coding gene
- Location chr02 : 27876111-27883698 : positive
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D000028
- #Genes/#Species 3637/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Os02t0682200-01
- MSU-ID LOC_Os02g45770.1
- symbol MADS6
- symbol OsMADS6
- symbol MFO1
- name mosaic floral organs 1
- name AGL6-like MADS Box gene
- name MADS box gene6
- uniprot Q6EU39
Descriptions
- Description MADS-box transcription factor, Regulation of floral organ identity and meristem fate, Endosperm development
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045944 | IEA | GOA Database | positive regulation of transcription by RNA polymerase II | |
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006357 | IBA | GOA Database | regulation of transcription by RNA polymerase II | |
| GO:0030154 | IEA | GOA Database | cell differentiation | |
| GO:0048444 | ISO | PLAZA Integrative Orthology | floral organ morphogenesis | Os04g0580700 |
| GO:0010468 | ISO | PLAZA Integrative Orthology | regulation of gene expression | AT3G61120 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT3G61120 |
| GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT2G45650 |
| GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT3G61120 |
| GO:0009911 | ISO | PLAZA Integrative Orthology | positive regulation of flower development | AT2G45650 |
| GO:0048457 | IMP | GOA Database | floral whorl morphogenesis | |
| GO:0010022 | IMP | GOA Database | meristem determinacy | |
| GO:0010093 | IMP | GOA Database | specification of floral organ identity | |
| GO:0080060 | IMP | GOA Database | integument development | |
| GO:0080112 | IMP | GOA Database | seed growth | |
| GO:0048316 | IMP | GOA Database | seed development | |
| GO:0048437 | IDA, IMP | GOA Database | floral organ development | |
| GO:0048449 | IGI | GOA Database | floral organ formation | |
| GO:0048455 | IMP | GOA Database | stamen formation | |
| GO:0045893 | IDA | GOA Database | positive regulation of transcription, DNA-templated | |
| GO:0048459 | IMP | GOA Database | floral whorl structural organization | |
| GO:0048509 | IGI | GOA Database | regulation of meristem development | |
| GO:0048833 | IMP | GOA Database | specification of floral organ number | |
| GO:0009553 | IMP | GOA Database | embryo sac development | |
| GO:0010094 | IMP | GOA Database | specification of carpel identity | |
| GO:0010582 | IMP | GOA Database | floral meristem determinacy | |
| GO:0009908 | IEA | GOA Database | flower development |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046983 | TAS, IEA | GOA Database | protein dimerization activity | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0000977 | IEA | GOA Database | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0000981 | IBA | GOA Database | DNA-binding transcription factor activity, RNA polymerase II-specific | |
| GO:0000978 | IBA | GOA Database | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
| GO:0003677 | TAS, IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT2G45650 |
| GO:0005515 | IPI | GOA Database | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |