Gene: MSTRG.12869

General Information

Structural Information

Species Avicennia marina
Gene Identifier MSTRG.12869
Transcript Identifier MSTRG.12869.1
Gene Type Coding gene
Location ScioBoG_17730_HRSCAF_17811 : 17405144-17408929 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000050
#Genes/#Species 4474/100
Phylogenetic origin

ID ORTHO05D002706
#Genes/#Species 268/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

tid MSTRG.12869.1

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010053	ISO	PLAZA Integrative Orthology	root epidermal cell differentiation	AT1G16890
GO:0010039	ISO	PLAZA Integrative Orthology	response to iron ion	AT1G16890
GO:0046686	ISO	PLAZA Integrative Orthology	response to cadmium ion	AT1G78870
GO:0006301	ISO	PLAZA Integrative Orthology	postreplication repair	AT1G78870
GO:0006511	ISO	PLAZA Integrative Orthology	ubiquitin-dependent protein catabolic process	AT1G16890

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004842	ISO	PLAZA Integrative Orthology	ubiquitin-protein transferase activity	AT1G16890
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G16890

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0031372	ISO	PLAZA Integrative Orthology	UBC13-MMS2 complex	AT1G16890

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR016135	Ubiquitin-conjugating enzyme/RWD-like
IPR000608	Ubiquitin-conjugating enzyme E2

Mapman id	Description
19.2.2.1.3	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC)