Gene: AT1G78870

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G78870
  • Transcript Identifier AT1G78870.2
  • Gene Type Coding gene
  • Location Chr1 : 29650589-29652203 : positive

Gene Family Information

  • ID HOM05D000050
  • #Genes/#Species 4474/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G78870.2
  • symbol UBC35
  • Alias UBC13A,UBIQUITIN CONJUGATING ENZYME 13A
  • uniprot Q94A97

Descriptions

  • Description ubiquitin-conjugating enzyme 35
  • Computational description ubiquitin-conjugating enzyme 35 (UBC35); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding; INVOLVED IN: root epidermal cell differentiation, response to cadmium ion, postreplication repair, response to iron ion, ubiquitin-dependent protein catabolic process; LOCATED IN: UBC13-MMS2 complex; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 36 (TAIR:AT1G16890.2); Has 10164 Blast hits to 10157 proteins in 398 species: Archae - 0; Bacteria - 2; Metazoa - 4429; Fungi - 2211; Plants - 1825; Viruses - 23; Other Eukaryotes - 1674 (source: NCBI BLink).
  • Computational description ubiquitin-conjugating enzyme 35 (UBC35); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding; INVOLVED IN: root epidermal cell differentiation, response to cadmium ion, postreplication repair, response to iron ion, ubiquitin-dependent protein catabolic process; LOCATED IN: UBC13-MMS2 complex; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 36 (TAIR:AT1G16890.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070534
IBA
Gene Ontologyprotein K63-linked ubiquitination1
GO:0046686
IEP
GOA Databaseresponse to cadmium ion
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0006301
IGI
IBA
Gene Ontologypostreplication repair1 2
GO:0000209
IBA
Gene Ontologyprotein polyubiquitination1
GO:0010053
IGI
Gene Ontologyroot epidermal cell differentiation3
GO:0010039
IMP
Gene Ontologyresponse to iron ion3
GO:0006511
IDA
Gene Ontologyubiquitin-dependent protein catabolic process4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0061631
IEA
GOA Databaseubiquitin conjugating enzyme activity
GO:0061631
IBA
Gene Ontologyubiquitin conjugating enzyme activity1
GO:0005515
IPI
Gene Ontologyprotein binding5
GO:0004842
IDA
Gene Ontologyubiquitin-protein transferase activity4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0005739
HDA
Gene Ontologymitochondrion6
GO:0031372
IPI
Gene OntologyUBC13-MMS2 complex2
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR000608 Ubiquitin-conjugating enzyme E2
Mapman id Description
19.2.2.1.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC)