Gene: AT1G16890

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G16890
  • Transcript Identifier AT1G16890.3
  • Gene Type Coding gene
  • Location Chr1 : 5776550-5778327 : negative

Gene Family Information

  • ID HOM05D000050
  • #Genes/#Species 4474/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G16890.3
  • symbol UBC36
  • Alias AtUBC36,UBC13B,UBIQUITIN CONJUGATING ENZYME 13B
  • uniprot Q9FZ48

Descriptions

  • Description ubiquitin-conjugating enzyme 36
  • Computational description ubiquitin-conjugating enzyme 36 (UBC36); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding; INVOLVED IN: root epidermal cell differentiation, response to iron ion, ubiquitin-dependent protein catabolic process; LOCATED IN: UBC13-MMS2 complex, plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 35 (TAIR:AT1G78870.2); Has 10019 Blast hits to 10015 proteins in 393 species: Archae - 0; Bacteria - 4; Metazoa - 4493; Fungi - 2117; Plants - 1786; Viruses - 23; Other Eukaryotes - 1596 (source: NCBI BLink).
  • Computational description ubiquitin-conjugating enzyme 36 (UBC36); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 35 (TAIR:AT1G78870.2).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000209
IBA
Gene Ontologyprotein polyubiquitination1
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0006301
IBA
Gene Ontologypostreplication repair1
GO:0070534
IBA
Gene Ontologyprotein K63-linked ubiquitination1
GO:0010053
IGI
Gene Ontologyroot epidermal cell differentiation2
GO:0010039
IMP
Gene Ontologyresponse to iron ion2
GO:0006511
IDA
Gene Ontologyubiquitin-dependent protein catabolic process3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0061631
IEA
GOA Databaseubiquitin conjugating enzyme activity
GO:0061631
IBA
Gene Ontologyubiquitin conjugating enzyme activity1
GO:0005515
IPI
Gene Ontologyprotein binding4
GO:0004842
IDA
Gene Ontologyubiquitin-protein transferase activity3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
HDA
ISM, IBA
Gene Ontologynucleus1 5
GO:0031372
IPI
Gene OntologyUBC13-MMS2 complex4
GO:0005886
HDA
Gene Ontologyplasma membrane6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR000608 Ubiquitin-conjugating enzyme E2
Mapman id Description
19.2.2.1.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC)