Gene: Lsat_1_v5_gn_9_37500

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_9_37500
  • Transcript Identifier Lsat_1_v5_gn_9_37500.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_9 : 39750603-39753137 : negative

Gene Family Information

  • ID HOM05D002899
  • #Genes/#Species 238/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_9_37500.v5
  • pacid 38923399

Descriptions

  • Description K13103 - tuftelin-interacting protein 11 (TFIP11)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010600
ISO
PLAZA Integrative Orthologyregulation of auxin biosynthetic process AT2G42330
GO:0006468
ISO
PLAZA Integrative Orthologyprotein phosphorylation AT2G42330
GO:0042752
ISO
PLAZA Integrative Orthologyregulation of circadian rhythm AT1G17070
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT1G17070

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G42330
GO:1990446
ISO
PLAZA Integrative OrthologyU1 snRNP binding AT1G17070
GO:0004674
ISO
PLAZA Integrative Orthologyprotein serine/threonine kinase activity AT2G42330

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031981
ISO
PLAZA Integrative Orthologynuclear lumen AT1G17070

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024933 Septin and tuftelin interacting protein
IPR022783 GCF, C-terminal
IPR000467 G-patch domain
IPR022159 Tuftelin interacting protein, N-terminal domain
Mapman id Description
16.2.7.3.2 RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.Intron-Lariat Spliceosome (ILS) complex.component STIPL