Gene: Lsat_1_v5_gn_4_22000

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_4_22000
  • Transcript Identifier Lsat_1_v5_gn_4_22000.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_4 : 33512773-33516466 : positive

Gene Family Information

  • ID HOM05D000234
  • #Genes/#Species 1784/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_4_22000.v5
  • pacid 38933096

Descriptions

  • Description PTHR22891:SF4 - PROTEIN ARGONAUTE 2-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035195
ISO
PLAZA Integrative Orthologygene silencing by miRNA Solyc02g069270.2
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA Solyc02g069280.2
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT1G31290
GO:0019048
ISO
PLAZA Integrative Orthologymodulation by virus of host process AT1G31280
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G31280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
IEA
InterProprotein binding
GO:0035197
ISO
PLAZA Integrative OrthologysiRNA binding AT1G31280
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G31280

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G31280
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G31280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003165 Piwi domain
IPR012337 Ribonuclease H-like superfamily
IPR003100 PAZ domain
IPR014811 Argonaute, linker 1 domain
IPR036397 Ribonuclease H superfamily
IPR036085 PAZ domain superfamily
IPR032474 Protein argonaute, N-terminal
Mapman id Description
12.5.1.15.2 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.non-canonical RdDM pathway.siRNA-binding factor (AGO2)