Gene: Lsat_1_v5_gn_2_23100

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_2_23100
  • Transcript Identifier Lsat_1_v5_gn_2_23100.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_2 : 52253399-52254832 : negative

Gene Family Information

  • ID HOM05D001201
  • #Genes/#Species 520/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_2_23100.v5
  • pacid 38961933

Descriptions

  • Description PTHR10359:SF28 - TRANSCRIPTIONAL ACTIVATOR DEMETER
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080111
IEA
InterProDNA demethylation
GO:0006281
IEA
InterProDNA repair
GO:0006284
ISO
PLAZA Homology (enrichment)base-excision repair HOM05D001201

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019104
IEA
InterProDNA N-glycosylase activity
GO:0035514
IEA
InterProDNA demethylase activity
GO:0003824
IEA
InterProcatalytic activity
GO:0051539
ISO
PLAZA Homology (enrichment)4 iron, 4 sulfur cluster binding HOM05D001201

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044811 DNA glycosylase, plant
IPR023170 Helix-hairpin-helix, base-excision DNA repair, C-terminal
IPR011257 DNA glycosylase
Mapman id Description
12.5.3.1 Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.methylcytosine-specific DNA glycosylase (ROS1)