Gene: Lsat_1_v5_gn_1_59281

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_1_59281
  • Transcript Identifier Lsat_1_v5_gn_1_59281.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_1 : 70780342-70785399 : negative

Gene Family Information

  • ID HOM05D001814
  • #Genes/#Species 361/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_1_59281.v5
  • pacid 38945421

Descriptions

  • Description PTHR23105:SF48 - 60S RIBOSOMAL PROTEIN L10A-1-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009955
ISO
PLAZA Integrative Orthologyadaxial/abaxial pattern specification AT2G27530
GO:0006412
ISO
PLAZA Homology (enrichment)translation HOM05D001814
GO:0090696
ISO
PLAZA Integrative Orthologypost-embryonic plant organ development AT2G27530
GO:0022900
IEA
InterProelectron transport chain

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
ISO
PLAZA Integrative Orthologystructural constituent of ribosome AT5G22440
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D001814
GO:0009055
IEA
InterProelectron transfer activity
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0051537
IEA
InterPro2 iron, 2 sulfur cluster binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015934
ISO
PLAZA Homology (enrichment)large ribosomal subunit HOM05D001814
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G27530
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G08360
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT5G22440
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G08360
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G22440
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit AT5G22440
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT5G22440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023674 Ribosomal protein L1-like
IPR028364 Ribosomal protein L1/ribosomal biogenesis protein
IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich
IPR010241 Ferredoxin [2Fe-2S], plant
IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR012675 Beta-grasp domain superfamily
IPR036010 2Fe-2S ferredoxin-like superfamily
Mapman id Description
1.1.5.1.1 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin electron carrier activities.NADP-reduction-targeted ferredoxin (Fd)
17.1.2.1.10 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL10a