Gene: AT1G08360

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G08360
  • Transcript Identifier AT1G08360.1
  • Gene Type Coding gene
  • Location Chr1 : 2636231-2637694 : positive

Gene Family Information

  • ID HOM05D001814
  • #Genes/#Species 361/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G08360.1
  • uniprot Q8VZB9

Descriptions

  • Description Ribosomal protein L1p/L10e family
  • Computational description Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation
GO:0000470
IBA
Gene Ontologymaturation of LSU-rRNA1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IBA
Gene OntologyRNA binding1
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0015934
IEA
GOA Databaselarge ribosomal subunit
GO:0015934
IEA
InterProlarge ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma2
GO:0005829
IDA
GOA Databasecytosol
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome3
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0022625
IDA
GOA Databasecytosolic large ribosomal subunit
GO:0022625
HDA
IBA
Gene Ontologycytosolic large ribosomal subunit1 4
GO:0042788
IDA
GOA Databasepolysomal ribosome
GO:0005576
HDA
Gene Ontologyextracellular region5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002143 Ribosomal protein L1
IPR028364 Ribosomal protein L1/ribosomal biogenesis protein
IPR023674 Ribosomal protein L1-like
IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich
Mapman id Description
17.1.2.1.10 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL10a