Gene: AT2G27530

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G27530
  • Transcript Identifier AT2G27530.1
  • Gene Type Coding gene
  • Location Chr2 : 11763443-11764570 : negative

Gene Family Information

  • ID HOM05D001814
  • #Genes/#Species 361/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G27530.1
  • symbol PGY1
  • full_name PIGGYBACK1
  • uniprot P59230

Descriptions

  • Description Ribosomal protein L1p/L10e family
  • Computational description PIGGYBACK1 (PGY1); FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: adaxial/abaxial pattern formation, post-embryonic organ development, translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT1G08360.1); Has 3883 Blast hits to 3882 proteins in 1276 species: Archae - 280; Bacteria - 1809; Metazoa - 457; Fungi - 188; Plants - 511; Viruses - 0; Other Eukaryotes - 638 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation
GO:0000470
IBA
Gene Ontologymaturation of LSU-rRNA1
GO:0090696
IGI
Gene Ontologypost-embryonic plant organ development2
GO:0009955
IGI
Gene Ontologyadaxial/abaxial pattern specification2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IBA
Gene OntologyRNA binding1
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015934
IEA
GOA Databaselarge ribosomal subunit
GO:0015934
IEA
InterProlarge ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0005829
IDA
GOA Databasecytosol
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome3
GO:0022625
IDA
GOA Databasecytosolic large ribosomal subunit
GO:0022625
HDA
IBA
Gene Ontologycytosolic large ribosomal subunit1 4
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0042788
IDA
GOA Databasepolysomal ribosome
GO:0005777
HDA
Gene Ontologyperoxisome5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028364 Ribosomal protein L1/ribosomal biogenesis protein
IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich
IPR002143 Ribosomal protein L1
IPR023674 Ribosomal protein L1-like
Mapman id Description
17.1.2.1.10 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL10a