Gene: Lj5g0003224
General Information
Structural Information
- Species Lotus japonicus
- Gene Identifier Lj5g0003224
- Transcript Identifier Lj5g0003224.1
- Gene Type Coding gene
- Location chr5 : 15423100-15425842 : negative
Gene Family Information
- ID HOM05D000234
- #Genes/#Species 1784/99
- Phylogenetic origin
- ID ORTHO05D001258
- #Genes/#Species 445/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Lj5g0003224.Lj1.0v1
- pacid 44925080
Descriptions
- Description PTHR22891//PTHR22891:SF20 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C // PROTEIN ARGONAUTE 4-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1904159 | ISO | PLAZA Integrative Orthology | megasporocyte differentiation | AT5G21150 |
| GO:0010529 | ISO | PLAZA Integrative Orthology | negative regulation of transposition | AT5G21150 |
| GO:0031047 | ISO | PLAZA Integrative Orthology | gene silencing by RNA | Solyc06g073540.4 |
| GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | AT5G21150 |
| GO:0009554 | ISO | PLAZA Integrative Orthology | megasporogenesis | AT5G21150 |
| GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT5G21150 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0035197 | ISO | PLAZA Integrative Orthology | siRNA binding | AT5G21150 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G21150 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G21150 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032473 | Protein argonaute, Mid domain |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR003165 | Piwi domain |
| IPR014811 | Argonaute, linker 1 domain |
| IPR036085 | PAZ domain superfamily |
| IPR036397 | Ribonuclease H superfamily |
| IPR003100 | PAZ domain |
| IPR032472 | Argonaute linker 2 domain |
| IPR032474 | Protein argonaute, N-terminal |
| Mapman id | Description |
|---|---|
| 12.5.1.13 | Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.siRNA-integrating factor (AGO) |